miRNA regulation of DNA damage response (WP1530)

Homo sapiens

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This is the first of two pathways which deals with the DNA damage response. It comprises two central gene products (ATM and ATR) influenced by different sources of DNA damage (in blue). The two central genes can both be divides into their most important genes. For the ATM pathway these are TP53 and CHEK2, while CHEK1 is most important for the ATR pathway. The goal of this first pathway is to provide an overview of the most important gene products, processes and changes in cell condition elicited by the DNA damage response while keeping it clear and understandable. Also some microRNAs are implemented to visualize the possible effects they can induce. By doing so a better understanding of the role microRNA play in the DNA damage response might arise. All processes take place in the cytoplasm, except when mentioned differently. Proteins on this pathway have targeted assays available via the [https://assays.cancer.gov/available_assays?wp_id=WP1530 CPTAC Assay Portal].

Authors

Jan Krumeich , Stan Gaj , Martina Summer-Kutmon , Andra Waagmeester , Martijn Van Iersel , Kristina Hanspers , Egon Willighagen , Alex Pico , Zahra Roudbari , Ryan Miller , Susan Coort , Finterly Hu , Eric Weitz , and Vanessa Sousa

Activity

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Cited In

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Organisms

Homo sapiens

Communities

ExRNA

Annotations

Pathway Ontology

microRNA pathway DNA repair pathway

Participants
Query Drugst.One

Label Type Compact URI Comment
Alkylating agents Metabolite chebi:22333
Estradiol Metabolite chebi:16469
Caffeine Metabolite chemspider:2424
7-hydroxystaurosporine Metabolite chemspider:65225
RAD51 GeneProduct ensembl:ENSG00000051180
APAF1 GeneProduct ensembl:ENSG00000120868
CCNB2 GeneProduct ensembl:ENSG00000157456
RAD52 GeneProduct ensembl:ENSG00000002016
RB1 GeneProduct ensembl:ENSG00000139687
GADD45B GeneProduct ensembl:ENSG00000099860
CDKN1A GeneProduct ensembl:ENSG00000124762
ABL1 GeneProduct ensembl:ENSG00000097007
ATR GeneProduct ensembl:ENSG00000175054
CDK2 GeneProduct ensembl:ENSG00000123374
CCND3 GeneProduct ensembl:ENSG00000112576
GADD45A GeneProduct ensembl:ENSG00000116717
CDKN1B GeneProduct ensembl:ENSG00000111276
RAD17 GeneProduct ensembl:ENSG00000152942
RFC GeneProduct ncbigene:5981
CHEK1 GeneProduct ensembl:ENSG00000149554
PIDD GeneProduct ncbigene:55367
TP53AIP1 GeneProduct ensembl:ENSG00000120471
CCND1 GeneProduct ensembl:ENSG00000110092
BID GeneProduct ensembl:ENSG00000015475
CASP9 GeneProduct ensembl:ENSG00000132906
GADD45G GeneProduct ensembl:ENSG00000130222
CCND2 GeneProduct ensembl:ENSG00000118971
PML GeneProduct ensembl:ENSG00000140464
NBN GeneProduct ncbigene:4683
CHEK2 GeneProduct ensembl:ENSG00000183765
FANCD2 GeneProduct ensembl:ENSG00000144554
CDK5 GeneProduct ensembl:ENSG00000164885
TLK2 GeneProduct ensembl:ENSG00000146872
TLK1 GeneProduct ensembl:ENSG00000198586
GADD45G GeneProduct ensembl:ENSG00000130222
SFN GeneProduct ensembl:ENSG00000175793
MIR15A GeneProduct ensembl:ENSG00000283785
BRCA1 GeneProduct ensembl:ENSG00000012048
GADD45B GeneProduct ensembl:ENSG00000099860
DDB2 GeneProduct ensembl:ENSG00000134574
PMAIP1 GeneProduct ensembl:ENSG00000141682
RB1 GeneProduct ensembl:ENSG00000139687
RPA2 GeneProduct ensembl:ENSG00000117748
GADD45A GeneProduct ensembl:ENSG00000116717
MDM2 GeneProduct ensembl:ENSG00000135679
FAS GeneProduct ensembl:ENSG00000026103
CCNE2 GeneProduct ensembl:ENSG00000175305
RAD1 GeneProduct ensembl:ENSG00000113456
PRKDC GeneProduct ensembl:ENSG00000253729
CASP8 GeneProduct ensembl:ENSG00000064012
CCNG1 GeneProduct ensembl:ENSG00000113328
BAX GeneProduct ensembl:ENSG00000087088
CASP3 GeneProduct ensembl:ENSG00000164305
CDK6 GeneProduct ensembl:ENSG00000105810
ATM GeneProduct ensembl:ENSG00000149311
SESN1 GeneProduct ensembl:ENSG00000080546
E2F1 GeneProduct ensembl:ENSG00000101412
CDK4 GeneProduct ensembl:ENSG00000135446
SMC1A GeneProduct ensembl:ENSG00000072501
CYCS GeneProduct ensembl:ENSG00000172115
MIR20A GeneProduct ensembl:ENSG00000283762
TP53 GeneProduct ensembl:ENSG00000141510
MIR145 GeneProduct ensembl:ENSG00000276365
HUS1 GeneProduct ensembl:ENSG00000188996
CCNE1 GeneProduct ensembl:ENSG00000105173
CCNB3 GeneProduct ensembl:ENSG00000147082
BBC3 GeneProduct ensembl:ENSG00000105327
RAD50 GeneProduct ensembl:ENSG00000113522
c-Myc GeneProduct ncbigene:4609
E2F1 GeneProduct ensembl:ENSG00000101412
RRM2B GeneProduct ensembl:ENSG00000048392
CDK1 GeneProduct ensembl:ENSG00000170312
CREB1 GeneProduct ncbigene:1385
MRE11 GeneProduct ncbigene:4361
CDC25C GeneProduct ensembl:ENSG00000158402
ATRIP GeneProduct ncbigene:84126
RAD9A GeneProduct ensembl:ENSG00000172613
TNFRSF10B GeneProduct ensembl:ENSG00000120889
H2AFX GeneProduct ensembl:ENSG00000188486
hsa-mir-24-1 GeneProduct ensembl:ENSG00000284459
CCNB1 GeneProduct ensembl:ENSG00000134057
CDC25A GeneProduct ensembl:ENSG00000164045

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