Biotic stress response gene network (WP4364)

Oryza sativa

Biotic stress response gene-network in rice

Authors

Sushma Naithani , Martina Summer-Kutmon , Denise Slenter , Alex Pico , Eric Weitz , and Egon Willighagen

Activity

last edited

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Cited In

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Organisms

Oryza sativa

Communities

Annotations

Pathway Ontology

stress response pathway signaling pathway

Participants

Label Type Compact URI Comment
GIP-9 GeneProduct :Os03g0736000
SnRK1A GeneProduct :Os05g0530500|mRNA|AF062479|CDS+3'UTR
OsWRKY62 GeneProduct :Os09g0417800 WRKY Family transcription factor 62 involved in biotic stress response and in NAC10 mediated abiotic stress response
OsMKK4 Protein :Os02g0787300|mRNA|AK120525|CDS+3'UTR
XB12 Protein :Os10g0577700|mRNA|AK061718|CDS+3'UTR
OsMPK1 Protein :Os06g0154500|mRNA|AB183398|CDS+3'UTR
OsWRKY71 Protein :Os02g0181300|mRNA|AK058773|CDS+3'UTR
GIP-1 Protein :Os03g0786100
XB21 Protein :Os12g0548200|mRNA|AK072993|CDS+3'UTR
Os01g0250900 Protein :Os01g0250900|mRNA|AK065179|CDS+3'UTR
OsMPK5 Protein :Os03g0285800|mRNA|AF216315|CDS+3'UTR
GRNL2 Protein :Os05g0563900|mRNA|AK062897|UTR
NRRH2 Protein :Os01g0508500|mRNA|AK120501|CDS+3'UTR
SGT1 Protein :Os08g0447200|mRNA|AK067377|CDS+3'UTR
OsMPK8 Protein :Os01g0665200|mRNA|AJ512643|CDS+3'UTR
XB2 Protein :Os06g0283200|mRNA|AK073829|CDS+3'UTR
GRNL1 Protein :Os1g0667900
GIP-23 Protein :Os10g0537300
rTGA2.1 Protein :Os07g0687700
TGA2.2 Protein :Os03g0318600
GIP-20 Protein :Os08g0562200
GIP-6 Protein :Os04g0471400
GIP-18 Protein :Os09g0115500
GIP-11 Protein :Os02g0782200
NH1 Protein :Os01g0194300|mRNA|AK120715|CDS+3'UTR
NRRH3 Protein :Os01g0508100|COMBINER_EST|CI557510|0
NRR Protein :Os01g0130200|COMBINER|CI449644|6
NRRIP-3 Protein :Os11g0139500|mRNA|AK103113|CDS+3'UTR
NRRH1 Protein :Os05g0368000|COMBINER_EST|Os05g0368000|8
TGA2.3 Protein :Os01g0279900|mRNA|AB051296|CDS+3'UTR
rLG2 Protein :Os01g0859500|mRNA|AK101338|CDS+3'UTR
NRRIP-1 Protein :O
TGA2.1IP-2 Protein :Os12g0573200|mRNA|AK111522|CDS+3'UTR
TGA2.1IP-1 Protein :Os07g0585000|mRNA|AK071269|CDS+3'UTR
NH2 Protein :Os01g0767900
NRRIP-2 Protein :Os07g0508300|mRNA|AK063908|CDS+3'UTR
XB2IP-1 Protein :Os06g0681400|mRNA|AK121590|CDS+3'UTR
XB2IP-2 Protein :Os04g0648500|mRNA|AK064227|CDS+3'UTR
XB2-IP-3 Protein :Os09g0133800|mRNA|AK060425|CDS+3'UTR
XB2IP-4 Protein :Os02g0148300|mRNA|AK071342|CDS+3'UTR
XA21 Protein :Os11g0569733
XB3 Protein :Os05g0112000|mRNA|AF272860|CDS
Os02g0817000 Protein :Os02g0817000
OsWRKY28 Protein :Os06g0649000|mRNA|AK106282|CDS+3'UTR
XB11 Protein :Os01g0128800
XB11IP-1 Protein :Os11g0568700|mRNA|AK099671|CDS+3'UTR
PBZ1IP-1 Protein :Os03g0183800|mRNA|AK100621|CDS+3'UTR
XB15 Protein :Os03g0821300|mRNA|AJ575237|5'UTR+CDS
PBZ1 Protein :Os12g0555500|mRNA|AK071613|CDS+3'UTR
XB11IP-2 Protein :Os08g0151700|mRNA|AK073149|CDS+3'UTR
PBZ1IP-2 Protein :Os03g0655400|mRNA|AB011368|CDS+3'UTR
XB22 Protein :Os07g0171100|mRNA|AF272978|CDS+3'UTR
OsRBOHB Protein :Os01g0360200|mRNA|AK060770|CDS+3'UTR
OSRac1 Protein :Os01g0229400|mRNA|AB029508|CDS+3'UTR OsRac1 Expresses in seed and a key component of rice defense and submergence tolerance signaling pathway. 3: WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks.; Hanumappa M; Preece J; Elser J; Nemeth D; Bono G; Wu K; Jaiswal P; Rice (N Y); 2013; PubMed 19: Towards establishment of a rice stress response interactome.; Seo YS; Chern M; Bartley LE; Han M; Jung KH; Lee I; Walia H; Richter T; Xu X; Cao P; Bai W; Ramanan R; Amonpant F; Arul L; Canlas PE; Ruan R; Park CJ; Chen X; Hwang S; Jeon JS; Ronald PC; PLoS Genet; 2011; PubMed
RAR1 Protein :Os02g0535400|mRNA|AK111881|CDS+3'UTR
OSMPK12 Protein :Os06g0708000|mRNA|AF177392|CDS+3'UTR
OSEREBP1 Protein :Os02g0782700|mRNA|AF193803|CDS+3'UTR
XB22IP-1 Protein :Os11g0106900|COMBINER_EST|CI445507|0
HSP90 Protein :Os09g0482100|mRNA|AB111810|CDS+3'UTR
OsWRKY67 Protein :Os05g0183100|mRNA|AK066252|CDS+3'UTR
RACK1A Protein :Os01g0686800 Guanine nucleotide-binding protein subunit beta-like protein A (RACK1A) Expresses in seed and is involved in XA21 mediated immunity and submergence tolerance in rice pathways
XB24 Protein :Os01g0771200 XB24, ATPase Expresses in seed and is involved in XA21 mediated immunity and subergemce tolerance in rice pathways
GIP13 Protein :Os02g0306401 GIP13, Nicotinanamine aminotransferase Expresses in seed and is involved in XA21 mediated immunity and submergence tolerance in rice pathways

References

  1. Root-specific expression of OsNAC10 improves drought tolerance and grain yield in rice under field drought conditions. Jeong JS, Kim YS, Baek KH, Jung H, Ha SH, Do Choi Y, et al. Plant Physiol. 2010 May;153(1):185–97. PubMed Europe PMC Scholia
  2. Towards establishment of a rice stress response interactome. Seo YS, Chern M, Bartley LE, Han M, Jung KH, Lee I, et al. PLoS Genet. 2011 Apr;7(4):e1002020. PubMed Europe PMC Scholia
  3. WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks. Hanumappa M, Preece J, Elser J, Nemeth D, Bono G, Wu K, et al. Rice (N Y). 2013 May 29;6(1):14. PubMed Europe PMC Scholia