Prader-Willi and Angelman syndrome (WP3998)

Homo sapiens

Prader-Willi syndrome

Authors

Kelly Janssen , Martina Summer-Kutmon , Friederike Ehrhart , Susan Coort , Egon Willighagen , Denise Slenter , Alex Pico , Anders Riutta , Kristina Hanspers , Eric Weitz , Finterly Hu , and Lars Willighagen

Activity

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Cited In

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Organisms

Homo sapiens

Communities

Diseases Rare Diseases

Annotations

Disease Ontology

Prader-Willi syndrome Angelman syndrome

Pathway Ontology

disease pathway

Participants

Label Type Compact URI Comment
L-dopaquinone Metabolite chebi:16852
L-tyrosine Metabolite chebi:58315
Ca2+ Metabolite chebi:29108
PWRN4 GeneProduct ensembl:ENSG00000260232
PWRN2 GeneProduct ensembl:ENSG00000260551
PWRN3 GeneProduct ensembl:ENSG00000260760
PWRN1 GeneProduct ensembl:ENSG00000259905
TUBGCP2 GeneProduct ensembl:ENSG00000130640
TUBGCP3 GeneProduct ensembl:ENSG00000126216
TUBGCP4 GeneProduct ensembl:ENSG00000137822
TUBGCP5 GeneProduct ensembl:ENSG00000153575
TUBGCP6 GeneProduct ensembl:ENSG00000128159
NUP42 GeneProduct uniprot:O15504
NUP155 GeneProduct uniprot:O75694
TPR GeneProduct uniprot:P12270
NUP214 GeneProduct uniprot:P35658
NUP62 GeneProduct uniprot:P37198
NUP153 GeneProduct uniprot:P49790
RANBP2 GeneProduct uniprot:P49792
NUP98 GeneProduct uniprot:P52948
SEC13 GeneProduct uniprot:P55735
NUP107 GeneProduct uniprot:P57740
RAE1 GeneProduct uniprot:P78406
NUP160 GeneProduct uniprot:Q12769
GLE1 GeneProduct uniprot:Q53GS7
NUP188 GeneProduct uniprot:Q5SRE5
NUP54 GeneProduct uniprot:Q7Z3B4
NUP93 GeneProduct uniprot:Q8N1F7
NUP43 GeneProduct uniprot:Q8NFH3
NUP37 GeneProduct uniprot:Q8NFH4
NUP35 GeneProduct uniprot:Q8NFH5
NUP210 GeneProduct uniprot:Q8TEM1
NUP133 GeneProduct uniprot:Q8WUM0
AHCTF1 GeneProduct uniprot:Q8WYP5
NUP205 GeneProduct uniprot:Q92621
SEH1L GeneProduct uniprot:Q96EE3
POM121 GeneProduct uniprot:Q96HA1
NUP88 GeneProduct uniprot:Q99567
NDC1 GeneProduct uniprot:Q9BTX1
NUP58 GeneProduct uniprot:Q9BVL2
NUP85 GeneProduct uniprot:Q9BW27
AAAS GeneProduct uniprot:Q9NRG9
NUP50 GeneProduct uniprot:Q9UKX7
FMR1 GeneProduct ensembl:ENSG00000102081
GOLGA6L2 GeneProduct ensembl:ENSG00000174450
EIF4E GeneProduct ensembl:ENSG00000151247
GOLGA8S GeneProduct ensembl:ENSG00000261739
UBE2N GeneProduct ensembl:ENSG00000177889
RNF8 GeneProduct ensembl:ENSG00000112130
SLC45A2 GeneProduct ensembl:ENSG00000164175
GABA(A) receptorsubunit delta GeneProduct ensembl:ENSG00000187730
HERC2 GeneProduct ensembl:ENSG00000128731
LHB GeneProduct uniprot:P01229
MDM4 GeneProduct uniprot:O15151
ARF GeneProduct uniprot:Q8N726
FSHB GeneProduct uniprot:P01225
GABA(A) receptor subunit beta-3 GeneProduct uniprot:P28472
CDC6 GeneProduct uniprot:Q99741
CGA GeneProduct uniprot:P01215
MDM2 GeneProduct uniprot:Q00987
GABA(A) receptor subunit alpha-5 GeneProduct uniprot:P31644
IPW GeneProduct ncbigene:3653
SNORD116@ GeneProduct ncbigene:692236
MAGEL2 GeneProduct ensembl:ENSG00000254585
CYFIP1 GeneProduct ensembl:ENSG00000273749
GABRA5 GeneProduct ensembl:ENSG00000186297
GABRB3 GeneProduct ensembl:ENSG00000166206
PCSK1 GeneProduct ensembl:ENSG00000175426
TUBGCP5 GeneProduct ensembl:ENSG00000275835
NHLH2 GeneProduct ensembl:ENSG00000177551
GABRG3 GeneProduct ensembl:ENSG00000182256
SNORD115@ GeneProduct ncbigene:692218
NIPA2 GeneProduct ensembl:ENSG00000140157
NIPA1 GeneProduct ensembl:ENSG00000170113
ATP10A GeneProduct ensembl:ENSG00000206190
SNORD108 GeneProduct ensembl:ENSG00000239014
SNURF GeneProduct ensembl:ENSG00000273173
SNRPN GeneProduct ensembl:ENSG00000128739
NDN GeneProduct ensembl:ENSG00000182636
UBE3A GeneProduct ensembl:ENSG00000114062
MKRN3 GeneProduct ensembl:ENSG00000179455
NPAP1 GeneProduct ensembl:ENSG00000185823
SNORD64 GeneProduct ensembl:ENSG00000276610
SNORD109A GeneProduct ensembl:ENSG00000274640
SNORD109B GeneProduct ensembl:ENSG00000239169
SNURF-SNRPN GeneProduct ensembl:ENSG00000128739
PCSK1 GeneProduct ensembl:ENSG00000175426
CGA GeneProduct uniprot:P01215
E2F1 GeneProduct ensembl:ENSG00000101412
UBE3A GeneProduct ensembl:ENSG00000114062
E2F1 GeneProduct ensembl:ENSG00000101412
OCA2 GeneProduct ensembl:ENSG00000104044
MSX1 GeneProduct ensembl:ENSG00000163132
DLX5 GeneProduct ensembl:ENSG00000105880
MAGEL2 GeneProduct ensembl:ENSG00000254585
NDN GeneProduct ensembl:ENSG00000182636
PCM1 GeneProduct ensembl:ENSG00000078674
FEZ1 GeneProduct ensembl:ENSG00000149557
BBS4 GeneProduct ensembl:ENSG00000140463
NGF GeneProduct ensembl:ENSG00000134259
FEZ1 GeneProduct ensembl:ENSG00000149557
PRKCZ GeneProduct ensembl:ENSG00000067606
BBS4 GeneProduct ensembl:ENSG00000140463
HTR2C GeneProduct ensembl:ENSG00000147246
GABRR1 GeneProduct ncbigene:2569
GABRR2 GeneProduct ncbigene:2570
GABRR3 GeneProduct ncbigene:200959
HTR2C Protein ensembl:ENSG00000147246
CCND1 Protein uniprot:P24385
CCND2 Protein uniprot:P30279
RB1 Protein uniprot:P06400
p16-INK4a Protein uniprot:P42771
CDKN2B Protein uniprot:P42772
NK3R Protein uniprot:P29371
KISS1 Protein uniprot:Q15726
P-protein Protein uniprot:Q04671
Tyrosinase Protein uniprot:P14679
p53 Protein uniprot:P04637
CDK4 Protein uniprot:P11802
NKB Protein uniprot:Q2UVB8
GHRH (1-108) Protein uniprot:P01286
GHRH (32-75) Protein uniprot:P01286
Insulin (25-110) Protein uniprot:P01308
POMC (1-241) Protein uniprot:P01189
Oxytocin-neurophysin 1 (1-125) Protein uniprot:P01178
Ghrelin (24-51) Protein uniprot:Q9UBU3
GNRH1 (24-92) Protein uniprot:P01148
POMC (138-150) Protein uniprot:P01189
Insulin B chain(25-54) Protein uniprot:P01308
GNRH1 (24-33) Protein uniprot:P01148
BDNF (1-247) Protein uniprot:P23560
Oxytocin (20-28) Protein uniprot:P01178
BDNF (129-247) Protein uniprot:P23560
Ghrelin (1-117) Protein uniprot:Q9UBU3
Insulin A chain(90-110) Protein uniprot:P01308
Insulin (57-87) Protein uniprot:P01308
p16-INK4a Protein uniprot:P42771
CDKN2C Protein uniprot:P42773
CCND1 Protein uniprot:P24385
CCND2 Protein uniprot:P30279
CDK6 Protein uniprot:Q00534
FEZ2 Protein ensembl:ENSG00000171055
GNRH1 Protein uniprot:P01148
GABRG2 Protein ensembl:ENSG00000113327
GABRG1 Protein ensembl:ENSG00000163285
GABRG3 Protein ensembl:ENSG00000182256

References

  1. mRNA Splicing - Major Pathway (update) [Internet]. May B, editor. Reactome. Reactome; Available from: http://dx.doi.org/10.3180/R-HSA-72163.3 DOI Scholia
  2. Insulin structure and stability. Brange J, Langkjoer L. Pharm Biotechnol. 1993;5:315–50. PubMed Europe PMC Scholia
  3. Identification, molecular cloning, and distribution of a short variant of the 5-hydroxytryptamine2C receptor produced by alternative splicing. Canton H, Emeson RB, Barker EL, Backstrom JR, Lu JT, Chang MS, et al. Mol Pharmacol. 1996 Oct;50(4):799–807. PubMed Europe PMC Scholia
  4. Mice devoid of gamma-aminobutyrate type A receptor beta3 subunit have epilepsy, cleft palate, and hypersensitive behavior. Homanics GE, DeLorey TM, Firestone LL, Quinlan JJ, Handforth A, Harrison NL, et al. Proc Natl Acad Sci U S A. 1997 Apr 15;94(8):4143–8. PubMed Europe PMC Scholia
  5. Regulation of serotonin-2C receptor G-protein coupling by RNA editing. Burns CM, Chu H, Rueter SM, Hutchinson LK, Canton H, Sanders-Bush E, et al. Nature. 1997 May 15;387(6630):303–8. PubMed Europe PMC Scholia
  6. Mammalian homologue of the Caenorhabditis elegans UNC-76 protein involved in axonal outgrowth is a protein kinase C zeta-interacting protein. Kuroda S, Nakagawa N, Tokunaga C, Tatematsu K, Tanizawa K. J Cell Biol. 1999 Feb 8;144(3):403–11. PubMed Europe PMC Scholia
  7. A highly conserved protein family interacting with the fragile X mental retardation protein (FMRP) and displaying selective interactions with FMRP-related proteins FXR1P and FXR2P. Schenck A, Bardoni B, Moro A, Bagni C, Mandel JL. Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8844–9. PubMed Europe PMC Scholia
  8. Essential role for the Prader-Willi syndrome protein necdin in axonal outgrowth. Lee S, Walker CL, Karten B, Kuny SL, Tennese AA, O’Neill MA, et al. Hum Mol Genet. 2005 Mar 1;14(5):627–37. PubMed Europe PMC Scholia
  9. Necdin, a Prader-Willi syndrome candidate gene, regulates gonadotropin-releasing hormone neurons during development. Miller NLG, Wevrick R, Mellon PL. Hum Mol Genet. 2009 Jan 15;18(2):248–60. PubMed Europe PMC Scholia
  10. HERC2 coordinates ubiquitin-dependent assembly of DNA repair factors on damaged chromosomes. Bekker-Jensen S, Rendtlew Danielsen J, Fugger K, Gromova I, Nerstedt A, Lukas C, et al. Nat Cell Biol. 2010 Jan;12(1):80–6; sup pp 1-12. PubMed Europe PMC Scholia
  11. Regulation of NKB pathways and their roles in the control of Kiss1 neurons in the arcuate nucleus of the male mouse. Navarro VM, Gottsch ML, Wu M, García-Galiano D, Hobbs SJ, Bosch MA, et al. Endocrinology. 2011 Nov;152(11):4265–75. PubMed Europe PMC Scholia
  12. A global view of the OCA2-HERC2 region and pigmentation. Donnelly MP, Paschou P, Grigorenko E, Gurwitz D, Barta C, Lu RB, et al. Hum Genet. 2012 May;131(5):683–96. PubMed Europe PMC Scholia
  13. The imprinted NPAP1/C15orf2 gene in the Prader-Willi syndrome region encodes a nuclear pore complex associated protein. Neumann LC, Markaki Y, Mladenov E, Hoffmann D, Buiting K, Horsthemke B. Hum Mol Genet. 2012 Sep 15;21(18):4038–48. PubMed Europe PMC Scholia
  14. Magel2 is required for leptin-mediated depolarization of POMC neurons in the hypothalamic arcuate nucleus in mice. Mercer RE, Michaelson SD, Chee MJS, Atallah TA, Wevrick R, Colmers WF. PLoS Genet. 2013;9(1):e1003207. PubMed Europe PMC Scholia
  15. Leptin signaling defects in a mouse model of Prader-Willi syndrome: An orphan genetic obesity syndrome no more? Colmers WF, Wevrick R. Rare Dis. 2013 Mar 27;1:e24421. PubMed Europe PMC Scholia
  16. A new pathway in the control of the initiation of puberty: the MKRN3 gene. Abreu AP, Macedo DB, Brito VN, Kaiser UB, Latronico AC. J Mol Endocrinol. 2015 Jun;54(3):R131-9. PubMed Europe PMC Scholia
  17. Loss of Magel2 impairs the development of hypothalamic Anorexigenic circuits. Maillard J, Park S, Croizier S, Vanacker C, Cook JH, Prevot V, et al. Hum Mol Genet. 2016 Aug 1;25(15):3208–15. PubMed Europe PMC Scholia
  18. Increased alternate splicing of Htr2c in a mouse model for Prader-Willi syndrome leads disruption of 5HT2C receptor mediated appetite. Garfield AS, Davies JR, Burke LK, Furby HV, Wilkinson LS, Heisler LK, et al. Mol Brain. 2016 Dec 8;9(1):95. PubMed Europe PMC Scholia
  19. Deficiency in prohormone convertase PC1 impairs prohormone processing in Prader-Willi syndrome. Burnett LC, LeDuc CA, Sulsona CR, Paull D, Rausch R, Eddiry S, et al. J Clin Invest. 2017 Jan 3;127(1):293–305. PubMed Europe PMC Scholia
  20. Beyond Epilepsy and Autism: Disruption of GABRB3 Causes Ocular Hypopigmentation. Delahanty RJ, Zhang Y, Bichell TJ, Shen W, Verdier K, Macdonald RL, et al. Cell Rep. 2016 Dec 20;17(12):3115–24. PubMed Europe PMC Scholia
  21. Reduced abundance of the E3 ubiquitin ligase E6AP contributes to decreased expression of the INK4/ARF locus in non-small cell lung cancer. Gamell C, Gulati T, Levav-Cohen Y, Young RJ, Do H, Pilling P, et al. Sci Signal. 2017 Jan 10;10(461):eaaf8223. PubMed Europe PMC Scholia
  22. Prader-Willi syndrome and Angelman syndrome: Visualisation of the molecular pathways for two chromosomal disorders. Ehrhart F, Janssen KJM, Coort SL, Evelo CT, Curfs LMG. World J Biol Psychiatry. 2019 Nov;20(9):670–82. PubMed Europe PMC Scholia
  23. γ-Tubulin has a conserved intrinsic property of self-polymerization into double stranded filaments and fibrillar networks. Chumová J, Trögelová L, Kourová H, Volc J, Sulimenko V, Halada P, et al. Biochim Biophys Acta Mol Cell Res. 2018 May;1865(5):734–48. PubMed Europe PMC Scholia