Principal pathways of carbon metabolism (WP112)

Saccharomyces cerevisiae

Based on Glycolysis and Gluconeogenesis Pathways at SGD and on Kruckeberg, AL and Dickinson, JR (2004) Carbon Metabolism in The Metabolism and Molecular Physiology of Saccharomyces cerevisiae, Dickinson, JR and Schweizer, M, eds, CRC Press.


Kdahlquist , Thomas Kelder , Egon Willighagen , Daniela Digles , Kristina Hanspers , Alex Pico , Denise Slenter , and Eric Weitz


last edited

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Saccharomyces cerevisiae



Pathway Ontology

lipid hormone signaling pathway


Label Type Compact URI Comment
2-Phosphoglycerate Metabolite cas:2553-59-5
Fructose 1,6-bisphosphate Metabolite cas:488-69-7
Glucose-6-phosphate Metabolite cas:59-56-3
Glyceraldehyde-3-phosphate Metabolite chebi:17138
D-6-Phospho-glucono-delta-lactone Metabolite cas:90-80-2
Acetate Metabolite cas:64-19-7
Oxaloacetate Metabolite cas:328-42-7
Glucose Metabolite wikidata:Q37525
Phosphoenolpyruvate Metabolite cas:138-08-9
Acetaldehyde Metabolite cas:75-07-0
Ethanol Metabolite cas:64-17-5
Glycerol 3-phosphate Metabolite cas:57-03-4
Acetyl-CoA Metabolite cas:72-89-9
Phosphate Metabolite cas:14265-44-2
3-Phosphoglycerate Metabolite cas:820-11-1
D-Ribose-5-Phosphate Metabolite cas:3615-55-2
Fructose-6-phosphate Metabolite cas:643-13-0
6-Phosphogluconate Metabolite cas:921-62-0
Glycerol Metabolite cas:56-81-5
Dihydroxyacetone Metabolite cas:96-26-4
Erythrose-4-phosphate Metabolite cas:585-18-2
Ribulose-5-phosphate Metabolite cas:4151-19-3
Malate Metabolite cas:6915-15-7
Ethanol Metabolite cas:64-17-5
Glyceraldehyde-3-phosphate Metabolite chebi:17138
Pyruvate Metabolite cas:127-17-3
Sedoheptulose-7-phosphate Metabolite cas:2646-35-7
1,3-Bisphosphoglycerate Metabolite cas:1981-49-3
Xylulose-5-phosphate Metabolite cas:60802-29-1
Acetate Metabolite cas:64-19-7
Fructose-6-phosphate Metabolite cas:643-13-0
Xylulose-5-phosphate Metabolite cas:60802-29-1
Acetaldehyde Metabolite cas:75-07-0
Isocitrate Metabolite cas:320-77-4
Fumarate Metabolite hmdb:HMDB0000134
Malate Metabolite cas:6915-15-7
Glyoxylate Metabolite hmdb:HMDB0000119
alpha-ketoglutarate Metabolite hmdb:HMDB0000208
Succinate Metabolite hmdb:HMDB0000254
Acetyl-CoA Metabolite cas:72-89-9
Succinyl-CoA Metabolite cas:604-98-8
Citrate Metabolite chemspider:29081
Pyruvate Metabolite hmdb:HMDB0000243
Oxaloacetate Metabolite hmdb:HMDB0000223
Acetyl-CoA Metabolite cas:72-89-9
FBP1 GeneProduct ensembl:YLR377C
PFK1 GeneProduct ensembl:YGR240C
PGI1 GeneProduct ensembl:YBR196C
PCK1 GeneProduct ensembl:YKR097W
ACS2 GeneProduct ensembl:YLR153C
GND1 GeneProduct ensembl:YHR183W
TKL2 GeneProduct ensembl:YBR117C
GND2 GeneProduct ensembl:YGR256W
ADH1 GeneProduct ensembl:YOL086C
GLK1 GeneProduct ensembl:YCL040W
PYC1 GeneProduct ensembl:YGL062W
FBA1 GeneProduct ensembl:YKL060C
SOL3 GeneProduct ensembl:YHR163W
MDH3 GeneProduct ensembl:YDL078C
GPD2 GeneProduct ensembl:YOL059W
CDC19 GeneProduct ensembl:YAL038W
HOR2 GeneProduct ensembl:YER062C
PDC5 GeneProduct ensembl:YLR134W
PYC2 GeneProduct ensembl:YBR218C
PGK1 GeneProduct ensembl:YCR012W
RKI1 GeneProduct ensembl:YOR095C
GPM1 GeneProduct ensembl:YKL152C
TKL1 GeneProduct ensembl:YPR074C
ENO2 GeneProduct ensembl:YHR174W
HXK1 GeneProduct ensembl:YFR053C
TDH1 GeneProduct ensembl:YJL052W
PDC6 GeneProduct ensembl:YGR087C
ALD6 GeneProduct ensembl:YPL061W
ACS1 (mt) GeneProduct ensembl:YAL054C
ADH4 (mt) GeneProduct ensembl:YGL256W
RPE1 GeneProduct ensembl:YJL121C
TKL2 GeneProduct ensembl:YBR117C
RHR2 GeneProduct ensembl:YIL053W
ZWF1 GeneProduct ensembl:YNL241C
GPD1 GeneProduct ensembl:YDL022W
TDH3 GeneProduct ensembl:YGR192C
PDC1 GeneProduct ensembl:YLR044C
GUT1 GeneProduct ensembl:YHL032C
TKL1 GeneProduct ensembl:YPR074C
SOL4 GeneProduct ensembl:YGR248W
TAL1 GeneProduct ensembl:YLR354C
ADH5 GeneProduct ensembl:YBR145W
MDH2 GeneProduct ensembl:YOL126C
ADH2 GeneProduct ensembl:YMR303C
TDH2 GeneProduct ensembl:YJR009C
ENO1 GeneProduct ensembl:YGR254W
PFK2 GeneProduct ensembl:YMR205C
HXK2 GeneProduct ensembl:YGL253W
ALD4 (mt) GeneProduct ensembl:YOR374W
GUT2 GeneProduct ensembl:YIL155C
ADH3 (mt) GeneProduct ensembl:YMR083W
TPI1 GeneProduct ensembl:YDR050C
PYK2 GeneProduct ensembl:YOR347C
CIT3 GeneProduct ensembl:YPR001W
SDH4 GeneProduct ensembl:YDR178W
LPD1 GeneProduct ensembl:YFL018C
CIT1 GeneProduct ensembl:YNR001C
SDH3 GeneProduct ensembl:YKL141W
SDH2 GeneProduct ensembl:YLL041C
IDP1 GeneProduct ensembl:YDL066W
SDH1 GeneProduct ensembl:YKL148C
LSC1 GeneProduct ensembl:YOR142W
MDH1 GeneProduct ensembl:YKL085W
LSC2 GeneProduct ensembl:YGR244C
IDH2 GeneProduct ensembl:YOR136W
LPD1 GeneProduct ensembl:YFL018C
FUM1 GeneProduct ensembl:YPL262W
IDP2 GeneProduct ensembl:YLR174W
PDX1 GeneProduct ensembl:YGR193C
ACO2 GeneProduct ensembl:YJL200C
LAT1 GeneProduct ensembl:YNL071W
PDB1 GeneProduct ensembl:YBR221C
MAE1 GeneProduct ensembl:YKL029C
CIT2 GeneProduct ensembl:YCR005C
PDA1 GeneProduct ensembl:YER178W
DAL7 GeneProduct ensembl:YIR031C
KGD2 GeneProduct ensembl:YDR148C
KGD1 GeneProduct ensembl:YIL125W
IDH1 GeneProduct ensembl:YNL037C
ICL1 GeneProduct ensembl:YER065C peroxisome
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MLS1 GeneProduct ensembl:YNL117W peroxisome
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ACO1 GeneProduct ensembl:YLR304C