wikipathways-collection

WikiPathways WP5561

• WikiPathways: WP5561 (classic)
• Species: Homo sapiens
• Scholia: WP5561

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 5 tests OK!
• GeneralTests
  • curationAndHypothetical: .. all OK!
  • curationAndNeedsWork: .. all OK!
  • curationAndReactome: .. all OK!
  • dataNodeWithoutGraphId: .. all OK!
  • duplicateTitles: .. all OK!
  • emptyDataSources: . all OK!
  • emptyLabelOfNodeWithIdentifier: .. all OK!
  • groupsHaveDetail: .. all OK!
  • noTags: .. all OK!
  • nullDataSources: .. all OK!
  • stockComments: .. all OK!
  • titlesShortEnough: .. all OK!
  • undefinedDataSources: .. all OK!
  • undefinedIdentifier: .. all OK!
  • weirdCharacterTitles: .x we found 1 problem(s):
    • Titles with unexpected characters (only allow alphanumerics and one of ‘/-.,:()[]’):1
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 32
  • UnconnectedPoints: .x we found 1 problem(s):
    • Interactions with unconnected points: 45
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 8 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 121
• Number of assertions: 243
• Number of fails: 3

Fails

GeneralTests.weirdCharacterTitles

Titles with unexpected characters (only allow alphanumerics and one of ‘/-.,:()[]’):1

http://classic.wikipathways.org/instance/WP5561_r139328 'Integrative Analysis of  Treg–Glial Interactions ' has 1 weird character(s)

Interactions with Labels

Interactions found that involve Labels: 32

• http://classic.wikipathways.org/instance/WP5561_r139328 “Pro-inflammatory cytokines” with graphId e0353
• http://classic.wikipathways.org/instance/WP5561_r139328 “Inflammation” with graphId b78bc
• http://classic.wikipathways.org/instance/WP5561_r139328 “PI3K/Akt-pathway” with graphId afaac
• http://classic.wikipathways.org/instance/WP5561_r139328 “Actin remodeling and cell migration” with graphId c4cc2
• http://classic.wikipathways.org/instance/WP5561_r139328 “Oligodendrogenesis” with graphId d71df
• http://classic.wikipathways.org/instance/WP5561_r139328 “JAK/STAT3 pathway” with graphId a9799
• http://classic.wikipathways.org/instance/WP5561_r139328 “MAPK/ERK pathway” with graphId ec21a
• http://classic.wikipathways.org/instance/WP5561_r139328 “MAPK/ERK-pathway” with graphId eb391
• http://classic.wikipathways.org/instance/WP5561_r139328 “ OPC differentiation” with graphId b163f
• http://classic.wikipathways.org/instance/WP5561_r139328 “Cell proliferation Tregs” with graphId dcfc2
• http://classic.wikipathways.org/instance/WP5561_r139328 “ Stimulation/activation” with graphId ef626
• http://classic.wikipathways.org/instance/WP5561_r139328 “Microglia phenotipic change: “Reparative microglia”” with graphId c9df4
• http://classic.wikipathways.org/instance/WP5561_r139328 “Secretion” with graphId cd0f4
• http://classic.wikipathways.org/instance/WP5561_r139328 “Expression of pro-inflammatory cytokines “ with graphId dd6c0
• http://classic.wikipathways.org/instance/WP5561_r139328 “PI3K/Akt-pathway” with graphId ceec8
• http://classic.wikipathways.org/instance/WP5561_r139328 “Damage BBB” with graphId de0e7
• http://classic.wikipathways.org/instance/WP5561_r139328 “MHC/Ag” with graphId c900f
• http://classic.wikipathways.org/instance/WP5561_r139328 “Chemotaxis” with graphId c0cd1
• http://classic.wikipathways.org/instance/WP5561_r139328 “OPC proliferation” with graphId facad
• http://classic.wikipathways.org/instance/WP5561_r139328 “Binding” with graphId da17b
• http://classic.wikipathways.org/instance/WP5561_r139328 “MAPK-pathway” with graphId dad2e
• http://classic.wikipathways.org/instance/WP5561_r139328 “PI3K/Akt/mTor pathway” with graphId d651b
• http://classic.wikipathways.org/instance/WP5561_r139328 “Microglial activity” with graphId d45b1
• http://classic.wikipathways.org/instance/WP5561_r139328 “RAC1/Akt-pathway” with graphId c7029
• http://classic.wikipathways.org/instance/WP5561_r139328 “Conversion” with graphId a61d5
• http://classic.wikipathways.org/instance/WP5561_r139328 “Gasdermin pore” with graphId ed610
• http://classic.wikipathways.org/instance/WP5561_r139328 “OPC migration” with graphId b35be
• http://classic.wikipathways.org/instance/WP5561_r139328 “AREG/EGFR/GSK-3ß pathway” with graphId a0cc8
• http://classic.wikipathways.org/instance/WP5561_r139328 “DNA” with graphId a15dc
• http://classic.wikipathways.org/instance/WP5561_r139328 “Neuroprotection and cell survival” with graphId a4646
• http://classic.wikipathways.org/instance/WP5561_r139328 “PI3K/Akt pathway” with graphId cba87
• http://classic.wikipathways.org/instance/WP5561_r139328 “Phagocytosis” with graphId a6ae1

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels

Interactions with unconnected points

Interactions with unconnected points: 45

• http://classic.wikipathways.org/instance/WP5561_r139328

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/UnconnectedPoints