wikipathways-collection

WikiPathways WP5420

• WikiPathways: WP5420 (classic)
• Species: Homo sapiens
• Scholia: WP5420

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 45
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .x we found 1 problem(s):
    • The following DataNodes have Unknown @Type: 4
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests
  • entrezGeneIdentifiersNotNumber: .. all OK!
  • affyProbeIdentifiersNotCorrect: .. all OK!
  • outdatedIdentifiers: …. all OK!
  • nonNumericHGNCAccessionNumbers: .. all OK!
  • genesWithoutEnsemblMapping: .x we found 1 problem(s):
    • The following genes with an identifier have been found but that do not have a mapping to Ensembl: 13
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 2
  • UnconnectedPoints: .x we found 1 problem(s):
    • Interactions with unconnected points: 29
  • possibleTranslocations: .x we found 1 problem(s):
    • Interactions between identical nodes: 83
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 10 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• UnicodeTests
  • water: .. all OK!
  • calcium: .x we found 1 problem(s):
    • Metabolite can use Ca²⁺ instead of Ca2+: 1
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 21
• Number of tests: 125
• Number of assertions: 251
• Number of fails: 7

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 45

• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/e34d5 (AKR)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/c9e55 (ALDH)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/fca6b (Alpha-dystroglycan)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/e783c (Anti-inflammatory pathways)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/a389b (Beta-dystroglycan)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ffe5d (CB Collybistin)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/cbfeb (COMT Inhibitors)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ebf1a (DRD4 VNTR exon III-7r)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/a5fbf (F-actin)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/b6910 (F-actin)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/c90c9 (F-actin)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/d4e2e (F-actin)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/b1d33 (HOMER)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/dcf47 (HOMER)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ac566 (HTR2C)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ea631 (HTR5b)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/fff7f (INFA)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/c4afa (MAO Inhibitors MAOIs)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/e70e0 (Metabolite)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/d616e (NA Aldehyde)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/c260f (NM Aldehyde )
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/bcee0 (NRIs (Atomoxetine /Strattera, Reboxetine /Edronax & Vestra))
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/b8df1 (P)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/c4b64 (P)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ff298 (P)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/a4195 (Pharmacological Intervention (drug))
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ffd3f (Protein)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/d279b (S-SCAM)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/db1ca (S-SCAM)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ab80b (SAPAP)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/af99e (SAPAP)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/be2e0 (SAPAP)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/f1469 (SAPAP)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/cdac1 (SHANK)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/d01af (SHANK)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ed811 (SHANK)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/fefd2 (SHANK)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/c0ded (SLC?)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/e0aeb (SLC?)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/de26c (SNP single nucleotide polymorphism)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ed3af (SNRIs (Desvenlafaxine, Duloxetine, Levomilnacipran, Milnacipran Venlafaxine))
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/c79aa (SSRIs (fluoxetine, citalopram, sertraline, paroxetine, escitalopram))
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/e0a80 (TBCD7)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/dc8cd (TDC )
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/d5335 (vitamin B12)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier

Datanodes of unknown type

The following DataNodes have Unknown @Type: 4

• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/b8df1 (P)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/c4b64 (P)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/ff298 (P)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/DataNode/a4195 (Pharmacological Intervention (drug))

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/unknownTypes

Genes with identifier but no Ensembl identifier mapping

The following genes with an identifier have been found but that do not have a mapping to Ensembl: 13

http://classic.wikipathways.org/instance/WP5420_r139334 rs7632287 with datasource dbSNP
http://classic.wikipathways.org/instance/WP5420_r139334 PRKAR2A with datasource EMBL
http://classic.wikipathways.org/instance/WP5420_r139334 rs237889 with datasource dbSNP
http://classic.wikipathways.org/instance/WP5420_r139334 rs237887 with datasource dbSNP
http://classic.wikipathways.org/instance/WP5420_r139334 rs151257822 with datasource dbSNP
http://classic.wikipathways.org/instance/WP5420_r139334 ADCY1 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP5420_r139334 rs53576 with datasource dbSNP
http://classic.wikipathways.org/instance/WP5420_r139334 rs2254298 with datasource dbSNP
http://classic.wikipathways.org/instance/WP5420_r139334 rs2268491 with datasource dbSNP
http://classic.wikipathways.org/instance/WP5420_r139334 rs35062132 with datasource dbSNP
http://classic.wikipathways.org/instance/WP5420_r139334 rs237897 with datasource dbSNP
http://classic.wikipathways.org/instance/WP5420_r139334 ADCY7 with datasource UniProtKB
http://classic.wikipathways.org/instance/WP5420_r139334 rs237902 with datasource dbSNP

More details at https://www.wikipathways.org/WikiPathwaysCurator/GeneTests/genesWithoutEnsemblMapping

Interactions with Labels

Interactions found that involve Labels: 2

• http://classic.wikipathways.org/instance/WP5420_r139334 “hydroxylation” with graphId b7b10
• http://classic.wikipathways.org/instance/WP5420_r139334 “Cytoskeletal Organizaiton

Regulation of actin cytoskeleton” with graphId c5993

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels

Interactions with unconnected points

Interactions with unconnected points: 29

• http://classic.wikipathways.org/instance/WP5420_r139334

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/UnconnectedPoints

Possible MIM translocation

Interactions between identical nodes: 83

• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id1697ca2e_1 “AEA” (https://identifiers.org/chebi/CHEBI:2700) and AEA” (https://identifiers.org/chebi/CHEBI:2700)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id2453f95c “5-MTHF” (https://identifiers.org/chebi/CHEBI:15641) and 5-MTHF” (https://identifiers.org/chebi/CHEBI:15641)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id37731fec “PLP” (https://identifiers.org/chebi/CHEBI:597326) and PLP” (https://identifiers.org/chebi/CHEBI:597326)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idb367e28f “THF” (https://identifiers.org/chebi/CHEBI:26907) and THF” (https://identifiers.org/chebi/CHEBI:26907)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id60a7c1e4 “PM” (https://identifiers.org/chebi/CHEBI:57761) and PM” (https://identifiers.org/chebi/CHEBI:57761)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id8d3efa4e “CBD” (https://identifiers.org/chebi/CHEBI:69478) and CBD” (https://identifiers.org/chebi/CHEBI:69478)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id86fd73d7 “GABA” (https://identifiers.org/chebi/CHEBI:59888) and GABA” (https://identifiers.org/chebi/CHEBI:59888)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idec7ea2f5 “PL” (https://identifiers.org/chebi/CHEBI:17310) and PL” (https://identifiers.org/chebi/CHEBI:17310)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id97ad82b4 “GABA” (https://identifiers.org/chebi/CHEBI:59888) and GABA” (https://identifiers.org/chebi/CHEBI:59888)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idf0c308b3 “Ca2+” (https://identifiers.org/chebi/CHEBI:29108) and Ca2+” (https://identifiers.org/chebi/CHEBI:29108)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id19018bd7 “PLP” (https://identifiers.org/chebi/CHEBI:597326) and PLP” (https://identifiers.org/chebi/CHEBI:597326)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idd9c11b2 “adrenaline” (https://identifiers.org/chebi/CHEBI:28918) and adrenaline” (https://identifiers.org/chebi/CHEBI:28918)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idf56e0e71 “serotonin” (https://identifiers.org/chebi/CHEBI:350546) and serotonin” (https://identifiers.org/chebi/CHEBI:350546)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idc32f66a9 “B9” (https://identifiers.org/chebi/CHEBI:27470) and B9” (https://identifiers.org/chebi/CHEBI:27470)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idb476947d “B9” (https://identifiers.org/chebi/CHEBI:27470) and B9” (https://identifiers.org/chebi/CHEBI:27470)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id72f424b9 “PLP” (https://identifiers.org/chebi/CHEBI:597326) and PLP” (https://identifiers.org/chebi/CHEBI:597326)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id2c72b972 “norepinephrine” (https://identifiers.org/chebi/CHEBI:72587) and norepinephrine” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id2c72b972 “norepinephrine” (https://identifiers.org/chebi/CHEBI:72587) and Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id2c72b972 “Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587) and norepinephrine” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id2c72b972 “Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587) and Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idb3ddf4dd “cob(II)alamin” (https://identifiers.org/chebi/CHEBI:16304) and cob(II)alamin” (https://identifiers.org/chebi/CHEBI:16304)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id65b12e9f “adrenaline” (https://identifiers.org/chebi/CHEBI:28918) and adrenaline” (https://identifiers.org/chebi/CHEBI:28918)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id32e912ac “B2” (https://identifiers.org/chebi/CHEBI:17015) and B2” (https://identifiers.org/chebi/CHEBI:17015)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id9d9dce48 “PM” (https://identifiers.org/chebi/CHEBI:57761) and PM” (https://identifiers.org/chebi/CHEBI:57761)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id5c96528b “norepinephrine” (https://identifiers.org/chebi/CHEBI:72587) and norepinephrine” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id5c96528b “norepinephrine” (https://identifiers.org/chebi/CHEBI:72587) and Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id5c96528b “Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587) and norepinephrine” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id5c96528b “Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587) and Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idd752d0e5 “adrenaline” (https://identifiers.org/chebi/CHEBI:28918) and adrenaline” (https://identifiers.org/chebi/CHEBI:28918)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idbebb3fd5 “dopamine” (https://identifiers.org/chebi/CHEBI:59905) and dopamine” (https://identifiers.org/chebi/CHEBI:59905)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id1697ca2e_2 “AEA” (https://identifiers.org/chebi/CHEBI:2700) and AEA” (https://identifiers.org/chebi/CHEBI:2700)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id95ace59c “L-glutamate” (https://identifiers.org/chebi/CHEBI:29985) and L-glutamate” (https://identifiers.org/chebi/CHEBI:29985)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/e63cc “serotonin” (https://identifiers.org/chebi/CHEBI:350546) and serotonin” (https://identifiers.org/chebi/CHEBI:350546)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/ida6e4b985 “Cbl” (https://identifiers.org/chebi/CHEBI:23334) and Cbl” (https://identifiers.org/chebi/CHEBI:23334)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/ida6e4b985 “Cbl” (https://identifiers.org/chebi/CHEBI:23334) and cobalamins” (https://identifiers.org/chebi/CHEBI:23334)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/ida6e4b985 “cobalamins” (https://identifiers.org/chebi/CHEBI:23334) and Cbl” (https://identifiers.org/chebi/CHEBI:23334)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/ida6e4b985 “cobalamins” (https://identifiers.org/chebi/CHEBI:23334) and cobalamins” (https://identifiers.org/chebi/CHEBI:23334)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id97be5d85 “serotonin” (https://identifiers.org/chebi/CHEBI:350546) and serotonin” (https://identifiers.org/chebi/CHEBI:350546)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id57394ed2 “L-glutamate” (https://identifiers.org/chebi/CHEBI:29985) and L-glutamate” (https://identifiers.org/chebi/CHEBI:29985)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id4dbffec “2-AG” (https://identifiers.org/chebi/CHEBI:52392) and 2-AG” (https://identifiers.org/chebi/CHEBI:52392)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id1c146cd2 “dopamine” (https://identifiers.org/chebi/CHEBI:59905) and dopamine” (https://identifiers.org/chebi/CHEBI:59905)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id886b8e11 “GABA” (https://identifiers.org/chebi/CHEBI:59888) and GABA” (https://identifiers.org/chebi/CHEBI:59888)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id4ba8f87f “BH4” (https://identifiers.org/chebi/CHEBI:15372) and BH4” (https://identifiers.org/chebi/CHEBI:15372)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id4ba8f87f “BH4” (https://identifiers.org/chebi/CHEBI:15372) and KUVAN (BH4 Supplement)” (https://identifiers.org/chebi/CHEBI:15372)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id4ba8f87f “KUVAN (BH4 Supplement)” (https://identifiers.org/chebi/CHEBI:15372) and BH4” (https://identifiers.org/chebi/CHEBI:15372)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id4ba8f87f “KUVAN (BH4 Supplement)” (https://identifiers.org/chebi/CHEBI:15372) and KUVAN (BH4 Supplement)” (https://identifiers.org/chebi/CHEBI:15372)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idbd55f5ab “B2” (https://identifiers.org/chebi/CHEBI:17015) and B2” (https://identifiers.org/chebi/CHEBI:17015)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id4e461577 “adrenaline” (https://identifiers.org/chebi/CHEBI:28918) and adrenaline” (https://identifiers.org/chebi/CHEBI:28918)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id539b8af2 “norepinephrine” (https://identifiers.org/chebi/CHEBI:72587) and norepinephrine” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id539b8af2 “norepinephrine” (https://identifiers.org/chebi/CHEBI:72587) and Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id539b8af2 “Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587) and norepinephrine” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id539b8af2 “Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587) and Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/b8614 “dopamine” (https://identifiers.org/chebi/CHEBI:59905) and dopamine” (https://identifiers.org/chebi/CHEBI:59905)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/ide4e00063 “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/ide4e00063 “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/ide4e00063 “PN” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/ide4e00063 “PN” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id7ec87464 “PL” (https://identifiers.org/chebi/CHEBI:17310) and PL” (https://identifiers.org/chebi/CHEBI:17310)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id3ef6cbb4 “5-MTHF” (https://identifiers.org/chebi/CHEBI:15641) and 5-MTHF” (https://identifiers.org/chebi/CHEBI:15641)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id7d86c191 “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id7d86c191 “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id7d86c191 “PN” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id7d86c191 “PN” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idb771d35a “PL” (https://identifiers.org/chebi/CHEBI:17310) and PL” (https://identifiers.org/chebi/CHEBI:17310)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id902a858d “B2” (https://identifiers.org/chebi/CHEBI:17015) and B2” (https://identifiers.org/chebi/CHEBI:17015)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idcf052662 “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idcf052662 “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idcf052662 “PN” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idcf052662 “PN” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id58033e01 “dopamine” (https://identifiers.org/chebi/CHEBI:59905) and dopamine” (https://identifiers.org/chebi/CHEBI:59905)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id76ed655b “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id76ed655b “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id76ed655b “PN” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id76ed655b “PN” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/b0b91 “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/b0b91 “PNP” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/b0b91 “PN” (https://identifiers.org/chebi/CHEBI:28803) and PNP” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/b0b91 “PN” (https://identifiers.org/chebi/CHEBI:28803) and PN” (https://identifiers.org/chebi/CHEBI:28803)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/idde3ff607 “cob(II)alamin” (https://identifiers.org/chebi/CHEBI:16304) and cob(II)alamin” (https://identifiers.org/chebi/CHEBI:16304)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id14626b48 “norepinephrine” (https://identifiers.org/chebi/CHEBI:72587) and norepinephrine” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id14626b48 “norepinephrine” (https://identifiers.org/chebi/CHEBI:72587) and Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id14626b48 “Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587) and norepinephrine” (https://identifiers.org/chebi/CHEBI:72587)
• http://classic.wikipathways.org/instance/WP5420_r139334 http://rdf.wikipathways.org/Pathway/WP5420_r139334/WP/Interaction/id14626b48 “Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587) and Norepinephrine NA” (https://identifiers.org/chebi/CHEBI:72587)

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/possibleTranslocations

Calcium chemical formula can use Unicode

Metabolite can use Ca²⁺ instead of Ca2+: 1

• http://classic.wikipathways.org/instance/WP5420_r139334

More details at https://www.wikipathways.org/WikiPathwaysCurator/UnicodeTests/calcium