wikipathways-collection
WikiPathways WP5372
- WikiPathways: WP5372 (classic)
- Species: Homo sapiens
- Scholia: WP5372
Tests
- CASMetabolitesTests: all 2 tests OK!
- ChEBIMetabolitesTests: all 5 tests OK!
- ChemSpiderTests: all 2 tests OK!
- DataNodesTests
- dataNodesWithoutIdentifier: .x we found 1 problem(s):
- unknownTypes_knownDatasource: .. all OK!
- unknownTypes: .x we found 1 problem(s):
- unknownTypes_Reactome: .. all OK!
- otherDataSource: .. all OK!
- EnsemblTests: all 4 tests OK!
- GeneTests: all 4 tests OK!
- GeneralTests: all 15 tests OK!
- HMDBSecMetabolitesTests: all 3 tests OK!
- InteractionTests: all 8 tests OK!
- KEGGMetaboliteTests: all 2 tests OK!
- LIPIDMAPSTests: all 1 tests OK!
- MetaboliteStructureTests: all 1 tests OK!
- MetabolitesTests: all 14 tests OK!
- OudatedDataSourcesTests: all 24 tests OK!
- PathwayTests: all 7 tests OK!
- ProteinsTests: all 2 tests OK!
- PubChemMetabolitesTests: all 3 tests OK!
- ReferencesTests: all 6 tests OK!
- UniProtTests: all 5 tests OK!
- WikidataTests: all 4 tests OK!
Summary
- Number of test classes: 20
- Number of tests: 117
- Number of assertions: 235
- Number of fails: 2
Fails
Data nodes without an identifier
The following DataNodes have no identifier: 5
- http://classic.wikipathways.org/instance/WP5372_r129533 http://rdf.wikipathways.org/Pathway/WP5372_r129533/DataNode/f7f35 (SET fragment)
- http://classic.wikipathways.org/instance/WP5372_r129533 http://rdf.wikipathways.org/Pathway/WP5372_r129533/DataNode/e9165 (SRPK2 fragment)
- http://classic.wikipathways.org/instance/WP5372_r129533 http://rdf.wikipathways.org/Pathway/WP5372_r129533/DataNode/cf07c (TDP-43 fragment)
- http://classic.wikipathways.org/instance/WP5372_r129533 http://rdf.wikipathways.org/Pathway/WP5372_r129533/DataNode/a0b29 (Tau (1-368) fragment )
- http://classic.wikipathways.org/instance/WP5372_r129533 http://rdf.wikipathways.org/Pathway/WP5372_r129533/DataNode/ddc80 (α-synuclein (1-103) fragment)
More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier
Datanodes of unknown type
The following DataNodes have Unknown @Type: 4
- http://classic.wikipathways.org/instance/WP5372_r129533 http://rdf.wikipathways.org/Pathway/WP5372_r129533/DataNode/a2be8 (Alzheimer’s disease)
- http://classic.wikipathways.org/instance/WP5372_r129533 http://rdf.wikipathways.org/Pathway/WP5372_r129533/DataNode/f22e6 (Amyotrophic lateral sclerosis)
- http://classic.wikipathways.org/instance/WP5372_r129533 http://rdf.wikipathways.org/Pathway/WP5372_r129533/DataNode/db869 (Frontotemporal dementia)
- http://classic.wikipathways.org/instance/WP5372_r129533 http://rdf.wikipathways.org/Pathway/WP5372_r129533/DataNode/e69af (Parkinson’s disease)
More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/unknownTypes