wikipathways-collection

WikiPathways WP5105

• WikiPathways: WP5105
• Scholia: WP5105

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 4 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .. all OK!
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .x we found 1 problem(s):
    • The following DataNodes have Unknown @Type: 4
  • unknownTypes_Reactome: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 3 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 6 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests
  • nonNumericPubMedIDs: .. all OK!
  • zeroPubMedIDs: .. all OK!
  • atLeastOneReference: .x we found 1 problem(s):
    • Found 1 pathways with zero (PubMed) references
  • citesRetractedArticle: .. all OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 93
• Number of assertions: 186
• Number of fails: 2

Fails

DataNodesTests.unknownTypes

The following DataNodes have Unknown @Type: 4

http://www.wikipathways.org/instance/WP5105_rr125316 http://rdf.wikipathways.org/Pathway/WP5105_rr125316/DataNode/ea448 (Dyslipidemia)
http://www.wikipathways.org/instance/WP5105_rr125316 http://rdf.wikipathways.org/Pathway/WP5105_rr125316/DataNode/a0296 (Hyperlipidemia)
http://www.wikipathways.org/instance/WP5105_rr125316 http://rdf.wikipathways.org/Pathway/WP5105_rr125316/DataNode/e0146 (Hypolipoproteinemia)
http://www.wikipathways.org/instance/WP5105_rr125316 http://rdf.wikipathways.org/Pathway/WP5105_rr125316/DataNode/f3dda (Lipodystrophy)

ReferencesTests.atLeastOneReference

Found 1 pathways with zero (PubMed) references

http://www.wikipathways.org/instance/WP5105_rr125316 'Meta pathway lipodystrophy, dyslipidemia and hyperlipidemia' in Homo sapiens has zero references; 

More details at https://wikipathways.github.io/WikiPathwaysCurator/ReferencesTests/atLeastOneReference