wikipathways-collection

WikiPathways WP5074

• WikiPathways: WP5074
• Scholia: WP5074

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 4 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 10
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .x we found 1 problem(s):
    • The following DataNodes have Unknown @Type: 5
  • unknownTypes_Reactome: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 3 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 2
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 6 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 4 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 93
• Number of assertions: 186
• Number of fails: 3

Fails

DataNodesTests.dataNodesWithoutIdentifier

The following DataNodes have no identifier: 10

http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/f44ec (Broadening of hipsMenstruation beginsDevelopment of breastsPubic & axiliary hair)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/f03ac (FGF)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/a4142 (Gene)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/d4c94 (Gene)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/d78e6 (Gene)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/feaad (Gene)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/d0071 (Voice breaksGrowth of muscle tissueEnlargement of genitaliaFacial, pubic & axiliary hair)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/d302e (ZFP24)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/e8ef7 (ZFP24)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/d6fdb (inhibitin)

DataNodesTests.unknownTypes

The following DataNodes have Unknown @Type: 5

http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/f44ec (Broadening of hipsMenstruation beginsDevelopment of breastsPubic & axiliary hair)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/daae6 (Cell migration)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/c7a77 (Myelination)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/d0071 (Voice breaksGrowth of muscle tissueEnlargement of genitaliaFacial, pubic & axiliary hair)
http://www.wikipathways.org/instance/WP5074_rr125313 http://rdf.wikipathways.org/Pathway/WP5074_rr125313/DataNode/d6fdb (inhibitin)

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 2

http://www.wikipathways.org/instance/WP5074_rr125313 "Ovaries" with graphId b6eca
http://www.wikipathways.org/instance/WP5074_rr125313 "Testes" with graphId e2e6f