wikipathways-collection

WikiPathways WP4861

• WikiPathways: WP4861 (classic)
• Species: Homo sapiens
• Scholia: WP4861

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 11
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 99
• Number of assertions: 200
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 11

http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/c90ec (Amino acid synthesis
Antioxidant response
Apoptosis)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/e0713 (C/EBP
CCAAT enhancer binding protein)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/d0da6 (CRE
cAMP response element)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/c085b (ER protein chaperones
Lipid biosynthesis
ER-associated degradation)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/e9fd9 (ER-associated
mRNA)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/ed36d (Global protein
translation)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/d43bc (MERS 4a)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/c094e (RIDD)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/a4bee (SARS 8ab)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/dc80b (SARS, IBV infection)
http://classic.wikipathways.org/instance/WP4861_r124658 http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/cd9a0 (SARS, OC43,
MHV, IBV infection)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier