wikipathways-collection

WikiPathways WP4786

• WikiPathways: WP4786
• Scholia: WP4786

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 4 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 4 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 3 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 16
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 6 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 4 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 93
• Number of assertions: 186
• Number of fails: 1

Fails

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 16

http://www.wikipathways.org/instance/WP4786_rr117852 "Triple helix" with graphId f18fe
http://www.wikipathways.org/instance/WP4786_rr117852 "Triple helix" with graphId afe34
http://www.wikipathways.org/instance/WP4786_rr117852 "Triple helix" with graphId ab0c9
http://www.wikipathways.org/instance/WP4786_rr117852 "Stabilised
triple helix" with graphId d96b3
http://www.wikipathways.org/instance/WP4786_rr117852 "modified alpha2 chain" with graphId b9121
http://www.wikipathways.org/instance/WP4786_rr117852 "Regulatory
Proteins" with graphId ea4ac
http://www.wikipathways.org/instance/WP4786_rr117852 "Regulatory proteins
transported from ER membrane
in times of ER stress" with graphId c38bc
http://www.wikipathways.org/instance/WP4786_rr117852 "Osteoblast differentiation
(bone formation)" with graphId a193c
http://www.wikipathways.org/instance/WP4786_rr117852 "Modified alpha1 chain" with graphId d4731
http://www.wikipathways.org/instance/WP4786_rr117852 "Mature type I 
collagen" with graphId ec37c
http://www.wikipathways.org/instance/WP4786_rr117852 "alpha1 chain with
chaperones" with graphId dde87
http://www.wikipathways.org/instance/WP4786_rr117852 "osteoblast-specific transcription
factor essential for bone development" with graphId c67d3
http://www.wikipathways.org/instance/WP4786_rr117852 "alpha1 chain with
chaperones" with graphId d3458
http://www.wikipathways.org/instance/WP4786_rr117852 "Stabilised fibrils" with graphId c355b
http://www.wikipathways.org/instance/WP4786_rr117852 "Differentiation 
to osteoclasts" with graphId b6304
http://www.wikipathways.org/instance/WP4786_rr117852 "Unknown crucial role during 
bone mineralization,
hypothesized interaction
with PEDF (SERPINH1)" with graphId a2aa3