wikipathways-collection

WikiPathways WP4784

• WikiPathways: WP4784 (classic)
• Species: Homo sapiens
• Scholia: WP4784

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 5 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 6
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 8 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 120
• Number of assertions: 241
• Number of fails: 1

Fails

Interactions with Labels

Interactions found that involve Labels: 6

• http://classic.wikipathways.org/instance/WP4784_r137911 “Newly synthesized proteoglycan” with graphId c8c96
• http://classic.wikipathways.org/instance/WP4784_r137911 “Newly synthesized proteoglycan” with graphId f1c48
• http://classic.wikipathways.org/instance/WP4784_r137911 “Glycosylated proteoglycan” with graphId f9593
• http://classic.wikipathways.org/instance/WP4784_r137911 “Sulfation of proteoglycan” with graphId a01a9
• http://classic.wikipathways.org/instance/WP4784_r137911 “Sulfur-containing amino acid metabolism” with graphId faf4d
• http://classic.wikipathways.org/instance/WP4784_r137911 “Proteoglycan core synthesized in rough endoplasmic reticulum” with graphId a2815

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels