wikipathways-collection

WikiPathways WP4707

• WikiPathways: WP4707 (classic)
• Species: Homo sapiens
• Scholia: WP4707

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 6 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 7
  • UnconnectedPoints: .x we found 1 problem(s):
    • Interactions with unconnected points: 3
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests
  • deletedPathways: .. all OK!
  • linksToDeletedPathways: .. all OK!
  • linksToDeletedPathways_All: .. all OK!
  • speciesMismatch: .. all OK!
  • testRoundedRectangle: .. all OK!
  • youMustCite: .. all OK!
  • oldLicenses: .. all OK!
  • mediawikiLinks: .. all OK!
  • allEmptyDescriptions: .. all OK!
  • allShortDescriptions: .x we found 1 problem(s):
    • Pathways of with a very short description: 1
  • multipleDescriptions: .. all OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• Sec2PriProjectTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• UnicodeTests: all 16 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 22
• Number of tests: 147
• Number of assertions: 293
• Number of fails: 3

Fails

Interactions with Labels

Interactions found that involve Labels: 7

• http://classic.wikipathways.org/instance/WP4707_r134316 “Cardiac hypertrophy and fibrosis” with graphId f8c66
• http://classic.wikipathways.org/instance/WP4707_r134316 “Esteradiol and ERβ” with graphId a9808
• http://classic.wikipathways.org/instance/WP4707_r134316 “Metastasis” with graphId ed6ef
• http://classic.wikipathways.org/instance/WP4707_r134316 “Cancer cell stability” with graphId b7658
• http://classic.wikipathways.org/instance/WP4707_r134316 “Cell growth and proliferation” with graphId d7c02
• http://classic.wikipathways.org/instance/WP4707_r134316 “Cancer cell concentration” with graphId d79a2
• http://classic.wikipathways.org/instance/WP4707_r134316 “Proliferation” with graphId a2808

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/interactionsWithLabels

Interactions with unconnected points

Interactions with unconnected points: 3

• http://classic.wikipathways.org/instance/WP4707_r134316

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/UnconnectedPoints

Pathway description is too short

Pathways of with a very short description: 1

• http://classic.wikipathways.org/instance/WP4707_r134316

More details at https://www.wikipathways.org/WikiPathwaysCurator/PathwayTests/allShortDescriptions