wikipathways-collection

WikiPathways WP4673

Summary

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 2

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier

No non-metabolite to metabolite conversions

Unexpected non-metabolite to metabolite conversions: 1

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/noNonMetaboliteToMetaboliteConversions

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 6

http://classic.wikipathways.org/instance/WP4673_r119920 "Sperm specific gene expression" with graphId e2d82
http://classic.wikipathways.org/instance/WP4673_r119920 "piRNA" with graphId e5545
http://classic.wikipathways.org/instance/WP4673_r119920 "DNA" with graphId d2a63
http://classic.wikipathways.org/instance/WP4673_r119920 "interacts with different proteins
that conctrol the translation of 
mRNAs of spermatogenesis associated proteins" with graphId acd5f
http://classic.wikipathways.org/instance/WP4673_r119920 "retrotransposons" with graphId cce8f
http://classic.wikipathways.org/instance/WP4673_r119920 "DNA
synapsed chromosome axis" with graphId eb246

Possible MIM translocation

Interactions between identical nodes: 5

http://classic.wikipathways.org/instance/WP4673_r119920 http://rdf.wikipathways.org/Pathway/WP4673_r119920/WP/Interaction/idfb2588eb "HMGA1" (https://identifiers.org/ensembl/ENSG00000137309) and 
HMGA1" (https://identifiers.org/ensembl/ENSG00000137309)
http://classic.wikipathways.org/instance/WP4673_r119920 http://rdf.wikipathways.org/Pathway/WP4673_r119920/WP/Interaction/idefc85102 "HIST1H4A" (https://identifiers.org/ensembl/ENSG00000278637) and 
HIST1H4A" (https://identifiers.org/ensembl/ENSG00000278637)
http://classic.wikipathways.org/instance/WP4673_r119920 http://rdf.wikipathways.org/Pathway/WP4673_r119920/WP/Interaction/id8a7e8672 "HIST3H3" (https://identifiers.org/ensembl/ENSG00000168148) and 
HIST3H3" (https://identifiers.org/ensembl/ENSG00000168148)
http://classic.wikipathways.org/instance/WP4673_r119920 http://rdf.wikipathways.org/Pathway/WP4673_r119920/WP/Interaction/id1446636f "PRDM9" (https://identifiers.org/ensembl/ENSG00000164256) and 
PRDM9" (https://identifiers.org/ensembl/ENSG00000164256)
http://classic.wikipathways.org/instance/WP4673_r119920 http://rdf.wikipathways.org/Pathway/WP4673_r119920/WP/Interaction/idf9d507f4 "HIST1H4A" (https://identifiers.org/ensembl/ENSG00000278637) and 
HIST1H4A" (https://identifiers.org/ensembl/ENSG00000278637)

More details at https://www.wikipathways.org/WikiPathwaysCurator/InteractionTests/possibleTranslocations