
WikiPathways WP4553
- WikiPathways: WP4553
- Scholia: WP4553
Tests
- CASMetabolitesTests: all 2 tests OK!
- ChEBIMetabolitesTests: all 4 tests OK!
- ChemSpiderTests: all 2 tests OK!
- DataNodesTests
- dataNodesWithoutIdentifier: .x we found 1 problem(s):
- unknownTypes_knownDatasource: .. all OK!
- unknownTypes: .. all OK!
- unknownTypes_Reactome: .. all OK!
- EnsemblTests: all 4 tests OK!
- GeneTests: all 4 tests OK!
- GeneralTests: all 13 tests OK!
- HMDBSecMetabolitesTests: all 3 tests OK!
- InteractionTests
- noMetaboliteToNonMetaboliteConversions: .. all OK!
- noNonMetaboliteToMetaboliteConversions: .. all OK!
- noGeneProteinConversions: .. all OK!
- nonNumericIDs: .. all OK!
- interactionsWithLabels: .x we found 1 problem(s):
- possibleTranslocations: .x we found 1 problem(s):
- noProteinProteinConversions: .. all OK!
- incorrectKEGGIdentifiers: .. all OK!
- KEGGMetaboliteTests: all 2 tests OK!
- LIPIDMAPSTests: all 1 tests OK!
- MetaboliteStructureTests: all 1 tests OK!
- MetabolitesTests: all 14 tests OK!
- OudatedDataSourcesTests: all 8 tests OK!
- PathwayTests: all 7 tests OK!
- ProteinsTests: all 2 tests OK!
- PubChemMetabolitesTests: all 3 tests OK!
- ReferencesTests: all 6 tests OK!
- UniProtTests: all 5 tests OK!
- WikidataTests: all 4 tests OK!
Summary
- Number of test classes: 20
- Number of tests: 97
- Number of assertions: 196
- Number of fails: 3
Fails
DataNodesTests.dataNodesWithoutIdentifier
The following DataNodes have no identifier: 3
http://classic.wikipathways.org/instance/WP4553_rr103606 http://rdf.wikipathways.org/Pathway/WP4553_rr103606/DataNode/c1121 (H2A)
http://classic.wikipathways.org/instance/WP4553_rr103606 http://rdf.wikipathways.org/Pathway/WP4553_rr103606/DataNode/d5da7 (H3)
http://classic.wikipathways.org/instance/WP4553_rr103606 http://rdf.wikipathways.org/Pathway/WP4553_rr103606/DataNode/bff2b (MAP/ERK Signaling)
InteractionTests.interactionsWithLabels
Interactions found that involve Labels: 1
http://classic.wikipathways.org/instance/WP4553_rr103606 "Cell proliferation" with graphId b2d90
InteractionTests.possibleTranslocations
Interactions between identical nodes: 1
http://classic.wikipathways.org/instance/WP4553_rr103606 http://rdf.wikipathways.org/Pathway/WP4553_rr103606/WP/Interaction/d5a9f "DUSP6" (https://identifiers.org/ensembl/ENSG00000139318) and
DUSP6" (https://identifiers.org/ensembl/ENSG00000139318)
More details at https://wikipathways.github.io/WikiPathwaysCurator/InteractionTests/possibleTranslocations