wikipathways-collection

WikiPathways WP4300

• WikiPathways: WP4300 (classic)
• Species: Homo sapiens
• Scholia: WP4300

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 9
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 99
• Number of assertions: 200
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 9

http://classic.wikipathways.org/instance/WP4300_r129338 http://rdf.wikipathways.org/Pathway/WP4300_r129338/DataNode/beeb3 (C. Fibrosis)
http://classic.wikipathways.org/instance/WP4300_r129338 http://rdf.wikipathways.org/Pathway/WP4300_r129338/DataNode/b45e2 (FGF)
http://classic.wikipathways.org/instance/WP4300_r129338 http://rdf.wikipathways.org/Pathway/WP4300_r129338/DataNode/f825a (HSP20)
http://classic.wikipathways.org/instance/WP4300_r129338 http://rdf.wikipathways.org/Pathway/WP4300_r129338/DataNode/f879c (HSP70)
http://classic.wikipathways.org/instance/WP4300_r129338 http://rdf.wikipathways.org/Pathway/WP4300_r129338/DataNode/c5eae (HSP90)
http://classic.wikipathways.org/instance/WP4300_r129338 http://rdf.wikipathways.org/Pathway/WP4300_r129338/DataNode/e1c60 (NF-kB Signaling)
http://classic.wikipathways.org/instance/WP4300_r129338 http://rdf.wikipathways.org/Pathway/WP4300_r129338/DataNode/c6a68 (PDGF)
http://classic.wikipathways.org/instance/WP4300_r129338 http://rdf.wikipathways.org/Pathway/WP4300_r129338/DataNode/f388a (Renin angiotensin
system (RAS))
http://classic.wikipathways.org/instance/WP4300_r129338 http://rdf.wikipathways.org/Pathway/WP4300_r129338/DataNode/ffc01 (p-Akt)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier