wikipathways-collection

WikiPathways WP3890

• WikiPathways: WP3890
• Scholia: WP3890

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 4 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 4 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 3 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 2
  • possibleTranslocations: .x we found 1 problem(s):
    • Interactions between identical nodes: 1
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 6 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 4 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 93
• Number of assertions: 186
• Number of fails: 2

Fails

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 2

http://www.wikipathways.org/instance/WP3890_rr124504 "Nanomaterial-Associated Molecular Patterns " with graphId fec77
http://www.wikipathways.org/instance/WP3890_rr124504 "PAMPs" with graphId c87a0

InteractionTests.possibleTranslocations

Interactions between identical nodes: 1

http://www.wikipathways.org/instance/WP3890_rr124504 http://rdf.wikipathways.org/Pathway/WP3890_rr124504/WP/Interaction/id35e1a91c "Potassium" (https://identifiers.org/hmdb/HMDB0000586) and 
Potassium" (https://identifiers.org/hmdb/HMDB0000586)

More details at https://wikipathways.github.io/WikiPathwaysCurator/InteractionTests/possibleTranslocations