wikipathways-collection

WikiPathways WP3622

• WikiPathways: WP3622 (classic)
• Species: Arabidopsis thaliana

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 12
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 99
• Number of assertions: 200
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 12

http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/cc48e (Amino acid metabolism)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/fe626 (Aromatic amino acid metabolism)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/c7532 (F25)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/b5923 (F32)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/ebd7e (Fatty acid synthesis)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/f9a89 (Flavonoid biosynthesis)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/a0061 (Glucosinolate biosynthesis)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/b046e (Glycolysis)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/fedfb (IndoleGSL)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/cb14f (Long chain organic acids)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/a55e3 (Sugar metabolism)
http://classic.wikipathways.org/instance/WP3622_r105906 http://rdf.wikipathways.org/Pathway/WP3622_r105906/DataNode/c3662 (TCA cycle)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier