wikipathways-collection

WikiPathways WP3200

• WikiPathways: WP3200 (classic)
• Species: Bos taurus

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 11
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 99
• Number of assertions: 200
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 11

http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/f3727 (
Ca

c
h
a
n
n
e
l)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/ea16a (
Na+/H+

e
x
c
h
a
n
g
e
r)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/c3d80 (Akt
Pathway)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/ea6d3 (CDC42)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/e7cfb (Cell Migration)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/f9a51 (Cell proliferation)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/f9b1a (Degradation)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/b4da8 (Filopodia
Formation)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/f1a94 (Lamellipodia
Formation)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/b713e (NFkB)
http://classic.wikipathways.org/instance/WP3200_r117588 http://rdf.wikipathways.org/Pathway/WP3200_r117588/DataNode/cddfa (NFkB)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier