wikipathways-collection
WikiPathways WP3178
- WikiPathways: WP3178 (classic)
- Species: Bos taurus
Tests
- CASMetabolitesTests: all 2 tests OK!
- ChEBIMetabolitesTests: all 5 tests OK!
- ChemSpiderTests: all 2 tests OK!
- DataNodesTests
- dataNodesWithoutIdentifier: .x we found 1 problem(s):
- unknownTypes_knownDatasource: .. all OK!
- unknownTypes: .. all OK!
- unknownTypes_Reactome: .. all OK!
- otherDataSource: .. all OK!
- EnsemblTests: all 4 tests OK!
- GeneTests: all 4 tests OK!
- GeneralTests: all 13 tests OK!
- HMDBSecMetabolitesTests: all 3 tests OK!
- InteractionTests: all 8 tests OK!
- KEGGMetaboliteTests: all 2 tests OK!
- LIPIDMAPSTests: all 1 tests OK!
- MetaboliteStructureTests: all 1 tests OK!
- MetabolitesTests: all 14 tests OK!
- OudatedDataSourcesTests: all 8 tests OK!
- PathwayTests: all 7 tests OK!
- ProteinsTests: all 2 tests OK!
- PubChemMetabolitesTests: all 3 tests OK!
- ReferencesTests: all 6 tests OK!
- UniProtTests: all 5 tests OK!
- WikidataTests: all 4 tests OK!
Summary
- Number of test classes: 20
- Number of tests: 99
- Number of assertions: 200
- Number of fails: 1
Fails
Data nodes without an identifier
The following DataNodes have no identifier: 12
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/b9963 (B-defensin2
etc
)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/dc3ac (CREB341)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/f41db (Cell
Cycle)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/a2f72 (Histone H3)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/d5151 (IFNalpha/beta)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/b8118 (IL1,8,6, TNFa,
IFNg, COX2, iNOS)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/f6aa8 (MEKK3)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/a910f (Modification)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/a98ff (NF-kappaB p50)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/a8032 (Translation)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/c0970 (c-Myc)
http://classic.wikipathways.org/instance/WP3178_r117963 http://rdf.wikipathways.org/Pathway/WP3178_r117963/DataNode/ab597 (cyclinD1
etc.)
More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier