wikipathways-collection

WikiPathways WP2431

• WikiPathways: WP2431 (classic)
• Species: Homo sapiens
• Scholia: WP2431

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 1
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 28
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 99
• Number of assertions: 200
• Number of fails: 2

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 1

http://classic.wikipathways.org/instance/WP2431_r120812 http://rdf.wikipathways.org/Pathway/WP2431_r120812/DataNode/e6dba (FBR)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 28

http://classic.wikipathways.org/instance/WP2431_r120812 "Demyelination" with graphId c6d3a
http://classic.wikipathways.org/instance/WP2431_r120812 "Glial Scar" with graphId ece06
http://classic.wikipathways.org/instance/WP2431_r120812 "Astrocyte Gliosis" with graphId d3b7f
http://classic.wikipathways.org/instance/WP2431_r120812 "Neuron & 
Oligodendrocyte
Apoptosis/Necrosis" with graphId bb029
http://classic.wikipathways.org/instance/WP2431_r120812 "Focal Adensions" with graphId ee4af
http://classic.wikipathways.org/instance/WP2431_r120812 "Monocytes" with graphId aa1e2
http://classic.wikipathways.org/instance/WP2431_r120812 "Astroctye" with graphId fbf41
http://classic.wikipathways.org/instance/WP2431_r120812 "Activated Microglia/
Macrophages" with graphId ec911
http://classic.wikipathways.org/instance/WP2431_r120812 "TT" with graphId cdc7a
http://classic.wikipathways.org/instance/WP2431_r120812 "Activated Microglia/
Macrophages" with graphId beb8a
http://classic.wikipathways.org/instance/WP2431_r120812 "Neuro protection" with graphId f4ab2
http://classic.wikipathways.org/instance/WP2431_r120812 "Oligodendrocyte" with graphId e8936
http://classic.wikipathways.org/instance/WP2431_r120812 "Microglia" with graphId c267c
http://classic.wikipathways.org/instance/WP2431_r120812 "Cytotoxic" with graphId fc9f4
http://classic.wikipathways.org/instance/WP2431_r120812 "T-Cells" with graphId b7883
http://classic.wikipathways.org/instance/WP2431_r120812 "Motor Neuron" with graphId c9a5a
http://classic.wikipathways.org/instance/WP2431_r120812 "Axonal Retraction" with graphId fa027
http://classic.wikipathways.org/instance/WP2431_r120812 "B Cell Stimulating" with graphId db650
http://classic.wikipathways.org/instance/WP2431_r120812 "Activated Microglia/
Macrophages" with graphId f6d4b
http://classic.wikipathways.org/instance/WP2431_r120812 "Monocyte Chemoattractants" with graphId bd92b
http://classic.wikipathways.org/instance/WP2431_r120812 "Spinal Cord 
Injury" with graphId e7eae
http://classic.wikipathways.org/instance/WP2431_r120812 "Chondroitin Sulfate 
Proteoglycans" with graphId ead30
http://classic.wikipathways.org/instance/WP2431_r120812 "TOXIC FERROUS
IRON" with graphId fc918
http://classic.wikipathways.org/instance/WP2431_r120812 "C3 Toxin" with graphId d58e5
http://classic.wikipathways.org/instance/WP2431_r120812 "Neurtrophils" with graphId acb58
http://classic.wikipathways.org/instance/WP2431_r120812 "Antibody Release" with graphId a2fe7
http://classic.wikipathways.org/instance/WP2431_r120812 "C1Q and Fc receptive cells" with graphId e85e7
http://classic.wikipathways.org/instance/WP2431_r120812 "Cytotoxic" with graphId ead0d