wikipathways-collection

WikiPathways WP2332

• WikiPathways: WP2332
• Scholia: WP2332

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 4 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 4 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 16
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests
  • nonNumericPubMedIDs: .. all OK!
  • unexpectedPubMedIdentifier: .. all OK!
  • zeroPubMedIDs: .. all OK!
  • atLeastOneReference: .x we found 1 problem(s):
    • Found 1 pathways with zero (PubMed) references
  • citesRetractedArticle: .. all OK!
  • outdatedPubMedIdentifiers: .. all OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 97
• Number of assertions: 196
• Number of fails: 2

Fails

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 16

http://classic.wikipathways.org/instance/WP2332_rr126373 "Phospholipase D" with graphId f4506
http://classic.wikipathways.org/instance/WP2332_rr126373 "NU" with graphId e0ef2
http://classic.wikipathways.org/instance/WP2332_rr126373 "CY" with graphId dd055
http://classic.wikipathways.org/instance/WP2332_rr126373 "NU" with graphId b896f
http://classic.wikipathways.org/instance/WP2332_rr126373 "CY" with graphId e52e9
http://classic.wikipathways.org/instance/WP2332_rr126373 "CY" with graphId cd74f
http://classic.wikipathways.org/instance/WP2332_rr126373 "NU" with graphId f8018
http://classic.wikipathways.org/instance/WP2332_rr126373 "CY" with graphId e95b6
http://classic.wikipathways.org/instance/WP2332_rr126373 "NU" with graphId a5b4a
http://classic.wikipathways.org/instance/WP2332_rr126373 "   Migration of 
chondrosarcoma cells" with graphId dd4d3
http://classic.wikipathways.org/instance/WP2332_rr126373 "Th2 polarization of" with graphId a0c16
http://classic.wikipathways.org/instance/WP2332_rr126373 "  Antiapoptotic effects 
to support mucosal integrity" with graphId f9f75
http://classic.wikipathways.org/instance/WP2332_rr126373 "Gastric inflammation and 
associated tumorigenesis" with graphId b8b74
http://classic.wikipathways.org/instance/WP2332_rr126373 "Receptor" with graphId bb0c5
http://classic.wikipathways.org/instance/WP2332_rr126373 "Osteoblastic differentiation of 
   periodontal ligament cells" with graphId d76de
http://classic.wikipathways.org/instance/WP2332_rr126373 "Endometrial epithelial 
     cell adhesion" with graphId d1069

ReferencesTests.atLeastOneReference

Found 1 pathways with zero (PubMed) references

http://classic.wikipathways.org/instance/WP2332_rr126373 'Interleukin-11 signaling pathway' in Homo sapiens has zero references; 

More details at https://wikipathways.github.io/WikiPathwaysCurator/ReferencesTests/atLeastOneReference