wikipathways-collection

WikiPathways WP1545

• WikiPathways: WP1545 (classic)
• Species: Homo sapiens
• Scholia: WP1545

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 26
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 99
• Number of assertions: 200
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 26

http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/cc19d (hsa-let-7a-1/7d cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/fa130 (hsa-let-7a-2/100 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/d5cbf (hsa-let-7a-3/7b cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/a4fa7 (hsa-miR-106b/25 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/daee3 (hsa-miR-17/92a-1 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/e86ce (hsa-miR-195/497 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/ba73b (hsa-miR-203 gene)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/f71bf (hsa-miR-210 gene)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/e74d6 (hsa-miR-21gene)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/ae6b3 (hsa-miR-222/221 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/a13cf (hsa-miR-223 gene)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/b76ec (hsa-miR-29b-1/29a cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/a4ad8 (hsa-miR-29b-2/29c cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/bac39 (hsa-miR-330 gene)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/c453a (hsa-miR-424/450b cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/d5bb9 (hsa-miR-449c/449a cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/cac6b (hsa-mir-143/145 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/c2c02 (hsa-mir-15a/16-1 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/a7a20 (hsa-mir-15b/16-2 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/d05f3 (hsa-mir-181a-1/181b-1 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/b0fb5 (hsa-mir-181a-2/181b-2 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/ed2f6 (hsa-mir-23a/24-2 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/e6562 (hsa-mir-23b/24-1 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/c3fdd (hsa-mir-34b/34c cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/f1914 (hsa-mir-371/373 cluster)
http://classic.wikipathways.org/instance/WP1545_r118363 http://rdf.wikipathways.org/Pathway/WP1545_r118363/DataNode/d06a5 (hsa-mir-374b/421 cluster)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier