WikiPathways WP1471
- WikiPathways: WP1471 (classic)
- Species: Homo sapiens
- Scholia: WP1471
Tests
- CASMetabolitesTests: all 2 tests OK!
- ChEBIMetabolitesTests: all 5 tests OK!
- ChemSpiderTests: all 2 tests OK!
- DataNodesTests
- dataNodesWithoutIdentifier: .x we found 1 problem(s):
- unknownTypes_knownDatasource: .. all OK!
- unknownTypes: .. all OK!
- unknownTypes_Reactome: .. all OK!
- otherDataSource: .. all OK!
- EnsemblTests: all 4 tests OK!
- GeneTests: all 4 tests OK!
- GeneralTests: all 13 tests OK!
- HMDBSecMetabolitesTests: all 3 tests OK!
- InteractionTests
- noMetaboliteToNonMetaboliteConversions: .. all OK!
- noNonMetaboliteToMetaboliteConversions: .. all OK!
- noGeneProteinConversions: .. all OK!
- nonNumericIDs: .. all OK!
- interactionsWithLabels: .x we found 1 problem(s):
- possibleTranslocations: .. all OK!
- noProteinProteinConversions: .. all OK!
- incorrectKEGGIdentifiers: .. all OK!
- KEGGMetaboliteTests: all 2 tests OK!
- LIPIDMAPSTests: all 1 tests OK!
- MetaboliteStructureTests: all 1 tests OK!
- MetabolitesTests: all 14 tests OK!
- OudatedDataSourcesTests: all 8 tests OK!
- PathwayTests: all 7 tests OK!
- ProteinsTests: all 2 tests OK!
- PubChemMetabolitesTests: all 3 tests OK!
- ReferencesTests: all 6 tests OK!
- UniProtTests: all 5 tests OK!
- WikidataTests: all 4 tests OK!
Summary
- Number of test classes: 20
- Number of tests: 99
- Number of assertions: 200
- Number of fails: 2
Fails
Data nodes without an identifier
The following DataNodes have no identifier: 6
http://classic.wikipathways.org/instance/WP1471_r126354 http://rdf.wikipathways.org/Pathway/WP1471_r126354/DataNode/f08aa (Actin Organization)
http://classic.wikipathways.org/instance/WP1471_r126354 http://rdf.wikipathways.org/Pathway/WP1471_r126354/DataNode/f367a (Autophagy)
http://classic.wikipathways.org/instance/WP1471_r126354 http://rdf.wikipathways.org/Pathway/WP1471_r126354/DataNode/f96db (Cytoskeletal dynamics)
http://classic.wikipathways.org/instance/WP1471_r126354 http://rdf.wikipathways.org/Pathway/WP1471_r126354/DataNode/da03b (Myelination)
http://classic.wikipathways.org/instance/WP1471_r126354 http://rdf.wikipathways.org/Pathway/WP1471_r126354/DataNode/cf883 (Ribosome biogenesis)
http://classic.wikipathways.org/instance/WP1471_r126354 http://rdf.wikipathways.org/Pathway/WP1471_r126354/DataNode/fa7bc (SREPB2)
More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier
InteractionTests.interactionsWithLabels
Interactions found that involve Labels: 4
http://classic.wikipathways.org/instance/WP1471_r126354 "high AMP:ATP" with graphId fc626
http://classic.wikipathways.org/instance/WP1471_r126354 "Survival" with graphId f04e6
http://classic.wikipathways.org/instance/WP1471_r126354 "Amino acids" with graphId ea169
http://classic.wikipathways.org/instance/WP1471_r126354 "Hypoxia" with graphId e8d52