wikipathways-collection

WikiPathways WP1358

• WikiPathways: WP1358 (classic)
• Species: Danio rerio

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 23
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 117
• Number of assertions: 235
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 23

• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/dcc (Crem)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/bb7 (Cystathionine g-lyase)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/cfb (DIO3)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/b61 (GPX1)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/b2e (GPX2)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/dd4 (GPX6)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/d176f (H2Se)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/e231d (MethylSelenol MeSeH)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/a89 (NFKB-p105)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/ce9 (Pouf2f1)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/a0d (Pstk)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/a0e (SBP2)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/ab2 (SBP2)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/e0a (SBP2)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/e33 (SelV)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/c5a95 (Selenate)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/d646e (Selenate)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/e7bbe (Selenite)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/f9c6f (Selenite)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/c55 (Sephs2)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/d74 (TXNRD2)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/fa9 (TXNRD2)
• http://classic.wikipathways.org/instance/WP1358_r116448 http://rdf.wikipathways.org/Pathway/WP1358_r116448/DataNode/d33 (UGA)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier