wikipathways-collection

WikiPathways WP1313

• WikiPathways: WP1313 (classic)
• Species: Danio rerio

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 12
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 99
• Number of assertions: 200
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 12

http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/edb (ARF1)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/cc4 (EHD1)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/c46 (EIF4EBP1)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/c8c (IRS4)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/f07 (MAP2K3)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/be2 (MAP4K1)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/ac2 (MAP4K4)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/b59 (PIK3R3)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/a2c5c (PTP)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/bf9 (RPS6KA3)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/c54 (RPS6KB2)
http://classic.wikipathways.org/instance/WP1313_r116791 http://rdf.wikipathways.org/Pathway/WP1313_r116791/DataNode/ce3 (SLC2A4)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier