wikipathways-collection

WikiPathways WP1310

• WikiPathways: WP1310 (classic)
• Species: Rattus norvegicus

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 47
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 5 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 9 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 15 tests OK!
• OudatedDataSourcesTests: all 24 tests OK!
• PathwayTests: all 8 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• UnicodeTests
  • water: .x we found 1 problem(s):
    • Metabolite can use H₂O instead of H2O: 1
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 21
• Number of tests: 122
• Number of assertions: 245
• Number of fails: 2

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 47

• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/a69dc (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/ace37 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/ae566 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/b42b4 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/b88a7 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/bccb9 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/bcf76 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/bef73 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/bf2a6 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/c2a00 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/c6347 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/cb0d2 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/cb984 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/d7bc0 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/d846e (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/dafe9 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/dcb6e (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/dd65f (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/decf6 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/e0e0a (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/e1920 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/e822b (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/e8e79 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/ef655 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/fc57f (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/fd183 (B)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/d4ce6 (Endoperoxidase)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/d2efc (IE)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/f76ea (IE)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/b85f6 (Lipoic acid)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/c2c24 (PGE2)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/cb792 (PGE2)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/e8079 (PGFS)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/a4616 (PGG3)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/daded (PGH3)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/a7bfd (RNS)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/acca9 (T)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/afd3d (T)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/ccaad (T)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/dc918 (T)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/f3fa9 (T)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/fad98 (T)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/ff58a (T)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/decd4 (TN)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/e051a (TN)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/cf73f (Uric acid)
• http://classic.wikipathways.org/instance/WP1310_r120918 http://rdf.wikipathways.org/Pathway/WP1310_r120918/DataNode/cc070 (d4 desaturase)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier

Water chemical formula can use Unicode

Metabolite can use H₂O instead of H2O: 1

* [http://classic.wikipathways.org/instance/WP1310_r120918](http://classic.wikipathways.org/instance/WP1310_r120918)

More details at https://www.wikipathways.org/WikiPathwaysCurator/UnicodeTests/water