wikipathways-collection

WikiPathways WP124

• WikiPathways: WP124
• Scholia: WP124

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 4 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 4 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 3 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .. all OK!
  • possibleTranslocations: .x we found 1 problem(s):
    • Interactions between identical nodes: 6
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 6 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 4 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 93
• Number of assertions: 186
• Number of fails: 1

Fails

InteractionTests.possibleTranslocations

Interactions between identical nodes: 6

http://www.wikipathways.org/instance/WP124_rr116621 http://rdf.wikipathways.org/Pathway/WP124_rr116621/WP/Interaction/idee634748 "SN-38" (https://identifiers.org/chebi/CHEBI:8988) and 
SN-38" (https://identifiers.org/chebi/CHEBI:8988)
http://www.wikipathways.org/instance/WP124_rr116621 http://rdf.wikipathways.org/Pathway/WP124_rr116621/WP/Interaction/id70d091ab "SN-38" (https://identifiers.org/chebi/CHEBI:8988) and 
SN-38" (https://identifiers.org/chebi/CHEBI:8988)
http://www.wikipathways.org/instance/WP124_rr116621 http://rdf.wikipathways.org/Pathway/WP124_rr116621/WP/Interaction/idc45c7af7 "Irinotecan" (https://identifiers.org/chebi/CHEBI:80630) and 
Irinotecan" (https://identifiers.org/chebi/CHEBI:80630)
http://www.wikipathways.org/instance/WP124_rr116621 http://rdf.wikipathways.org/Pathway/WP124_rr116621/WP/Interaction/id2580a15f "SN-38G" (https://identifiers.org/chebi/CHEBI:8990) and 
SN-38G" (https://identifiers.org/chebi/CHEBI:8990)
http://www.wikipathways.org/instance/WP124_rr116621 http://rdf.wikipathways.org/Pathway/WP124_rr116621/WP/Interaction/idaf056ede "SN-38" (https://identifiers.org/chebi/CHEBI:8988) and 
SN-38" (https://identifiers.org/chebi/CHEBI:8988)
http://www.wikipathways.org/instance/WP124_rr116621 http://rdf.wikipathways.org/Pathway/WP124_rr116621/WP/Interaction/id4a704180 "Irinotecan" (https://identifiers.org/chemspider/54825) and 
Irinotecan" (https://identifiers.org/chebi/CHEBI:80630)

More details at https://wikipathways.github.io/WikiPathwaysCurator/InteractionTests/possibleTranslocations