wikipathways-collection

WikiPathways WP1067

• WikiPathways: WP1067 (classic)
• Species: Bos taurus

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 10
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 99
• Number of assertions: 200
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 10

http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/c2ad6 (CCL3)
http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/fcdbf (CCL4)
http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/fe2c9 (Flagellar assembly)
http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/c048e (Lipopolysaccharide
biosynthesis)
http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/ead9d (MyD88-dependent pathway)
http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/cb34a (MyD88-independent pathway)
http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/f6cb3 (PIK3R2)
http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/a7a5f (TLR1)
http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/d1c56 (TLR8)
http://classic.wikipathways.org/instance/WP1067_r122566 http://rdf.wikipathways.org/Pathway/WP1067_r122566/DataNode/c5c35 (Ubiquitin mediated proteolysis)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier