wikipathways-collection

WikiPathways WP1006

• WikiPathways: WP1006 (classic)
• Species: Bos taurus

  Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests
  • dataNodesWithoutIdentifier: .x we found 1 problem(s):
    • The following DataNodes have no identifier: 46
  • unknownTypes_knownDatasource: .. all OK!
  • unknownTypes: .. all OK!
  • unknownTypes_Reactome: .. all OK!
  • otherDataSource: .. all OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 8 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 1 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 8 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 4 tests OK!

Summary

• Number of test classes: 20
• Number of tests: 99
• Number of assertions: 200
• Number of fails: 1

Fails

Data nodes without an identifier

The following DataNodes have no identifier: 46

http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/d09ef (Aldo-keto reductase)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/b271f (Amino acid acyltransferase)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/bcbb6 (CYP2A6)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/aba70 (CYP450)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/dd427 (CYP4Z1)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/a388e (Flavin monooxygenase)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/c178e (GLYATL1)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/b328f (GPX1)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/e824b (GPX5)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/b7eb8 (GSTA1)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/f73ed (GSTA2)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/eb3ec (GSTM1)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/cfd2e (GSTM2)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/dd274 (GSTM5)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/cbe8f (GSTT1)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/da3c4 (Glucuronosyltransferase)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/e866f (Glutathione transferase)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/e76b6 (HS3ST3B1)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/e4c63 (HS3ST4)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/d6171 (HS3ST5)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/c854c (HS6ST2)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/cfaf5 (INMT)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/d0c80 (Methyltransferase)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/b435b (N-acetyltransferase)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/bee66 (NAT6)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/cfca9 (NNMT)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/c140c (Substrate-Aa)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/dad5e (Substrate-Ac)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/c1c2a (Substrate-CH3)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/dd65e (Substrate-Gl)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/b3747 (Substrate-NH2)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/d5432 (Substrate-O-R)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/db566 (Substrate-OH)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/f7f74 (Substrate-SG)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/a4ec8 (Substrate-SH)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/e8313 (Substrate-SO3H)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/be8c4 (Substrate=O)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/a0c55 (Sulfotransferase)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/b8cec (UGT1A10)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/e5032 (UGT1A6)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/b0998 (UGT1A7)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/f6355 (UGT1A8)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/bbd33 (UGT1A9)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/cf3f7 (UGT2A2)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/d41d3 (UGT2B15)
http://classic.wikipathways.org/instance/WP1006_r80841 http://rdf.wikipathways.org/Pathway/WP1006_r80841/DataNode/f7f9c (Xenobiotic substrate)

More details at https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier