De novo biosynthesis of pyrimidine ribonucleotides (WP92)

Saccharomyces cerevisiae

The ergosterol biosynthesis pathway is required for generation of a major constituent of the fungal plasma membrane, ergosterol (CITS: [Paltauf])(CITS: [8561481]). This pathway is fungal-specific; plasma membranes of other organisms are composed predominantly of other types of sterol. However, the pathway is not universally present in fungi; for example, Pneumocystis carinii plasma membranes lack ergosterol (CITS: [12531182]). In S. cerevisiae, some steps in the pathway are dispensible while others are essential for viability (CITS: [8277826]). The ergosterol biosynthesis pathway has been the subject of intensive investigation as a target of antifungal drugs (CITS: [11815273]). The major target of azole antifungal drugs is lanosterol 14-alpha demethylase, a member of the cytochrome P450 family known as Erg11 protein in many fungal species. Squalene epoxidase (Erg1p in S. cerevisiae) is the specific target of allylamine drugs such as terbinafine (CITS: [14638499]). Mutations in the genes encoding these enzymes and others in the pathway, as well as alterations in the expression levels of the pathway constituents, can lead to antifungal drug resistance (CITS: [11815273]). SOURCE: SGD pathways, http://pathway.yeastgenome.org/server.html

Authors

Meredith Braymer , Egon Willighagen , Susan Coort , and Eric Weitz

Activity

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Organisms

Saccharomyces cerevisiae

Communities

Annotations

Pathway Ontology

de novo pyrimidine biosynthetic pathway

Participants

Label Type Compact URI Comment
CO2 Metabolite chemspider:274
UTP Metabolite pubchem.compound:6133
H2O Metabolite hmdb:HMDB0002111
carbamoyl-L-aspartate Metabolite pubchem.compound:279
H2O Metabolite hmdb:HMDB0002111
H+ Metabolite chemspider:1010
UMP Metabolite pubchem.compound:6030
carbamoyl-phosphate Metabolite pubchem.compound:3423467
H2O Metabolite hmdb:HMDB0002111
HCO3- Metabolite chemspider:749
UDP Metabolite pubchem.compound:1158
CTP Metabolite pubchem.compound:6176
L-aspartate Metabolite chebi:29991
orotidine-5'-phosphate Metabolite pubchem.compound:160617
dihydroorotate Metabolite chemspider:1232048
orotate Metabolite chemspider:942
ATP Metabolite cas:1927-31-7
phosphate Metabolite cas:14265-44-2
ADP Metabolite cas:58-64-0
phosphate Metabolite cas:14265-44-2
2 ATP Metabolite cas:1927-31-7
L-glutamine Metabolite cas:56-85-9
ADP Metabolite cas:58-64-0
ATP Metabolite cas:1927-31-7
ATP Metabolite cas:1927-31-7
ATP Metabolite cas:1927-31-7
phosphate Metabolite cas:14265-44-2
L-glutamate Metabolite cas:56-86-0
pyrophosphate Metabolite cas:2466-09-3
L-glutamate Metabolite cas:56-86-0
2 ADP Metabolite cas:58-64-0
ADP Metabolite cas:58-64-0
CDP Metabolite cas:63-38-7
L-glutamine Metabolite cas:56-85-9
PRPP Metabolite cas:97-55-2
ADP Metabolite cas:58-64-0
URA2 GeneProduct sgd:S000003666
URA1 GeneProduct sgd:S000001699
URA6 GeneProduct sgd:S000001507
URA4 GeneProduct sgd:S000004412
URA7 GeneProduct sgd:S000000135
URA5 GeneProduct sgd:S000004574
URA2 GeneProduct sgd:S000003666
YNK1 GeneProduct sgd:S000001550
URA8 GeneProduct sgd:S000003864
URA10 GeneProduct sgd:S000004884
URA3 GeneProduct sgd:S000000747

References

  1. The ORF YBL042 of Saccharomyces cerevisiae encodes a uridine permease. Wagner R, de Montigny J, de Wergifosse P, Souciet JL, Potier S. FEMS Microbiol Lett. 1998 Feb 1;159(1):69–75. PubMed Europe PMC Scholia