GABA receptor signaling (WP4159)

Homo sapiens

GABA is the main inhibitory neurotransmitter in the mammalian CNS. It is synthesized from glutamate by the enzyme L-glutamic acid decarboxylase. The GABA transporter GAT, located in the plasma membrane of nerve terminals and glial cells, plays an important role in the termination of synaptic transmission. GABA enters the cell via GAT and is then converted to gamma hydroxybutarate or succinate, the latter eventually entering the citrate cycle. There are three GABA receptors: GABA(A), GABA(B) and GABA(C) receptor. GABA(A) and GABA(C) receptors belong to the family of transmitter-gated ion channels while GABA(B) receptor is a G protein coupled receptor which is activated by baclofen. GABA(A) receptors are hetero-oligomeric Cl- channels that are modulated by barbiturates and benzodiazepines. GABA(A)R-associated protein (GABARAP) is localized in the golgi and plays a role in intracellular GABA (A) receptor transport via its ability to interact with N-ethylmaleimide-sensitive factor (NSF) and gephyrin (GPHN). Surface receptor number is important since it is a determinant of inhibitory synapse strength. It is controlled by removal of receptors from the membrane by interaction with the clathrin adaptor AP2 followed by recruitment into clathrin-coated pits. GABA(A) receptors can then be targeted for proteasomal degradation. Proteins on this pathway have targeted assays available via the [https://assays.cancer.gov/available_assays?wp_id=WP4159 CPTAC Assay Portal]

Authors

Denise Slenter , Irene Hemel , Kristina Hanspers , Alex Pico , Eric Weitz , Finterly Hu , and Egon Willighagen

Activity

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Organisms

Homo sapiens

Communities

Annotations

Cell Type Ontology

GABAergic neuron

Pathway Ontology

neurotransmitter metabolic pathway benzodiazepine pharmacodynamics pathway synaptic vesicle exocytosis - neurotransmitter release pathway calcium channel blocker drug pathway gamma-aminobutyric acid signaling pathway signaling pathway

Participants

Label Type Compact URI Comment
gamma-hydroxybutyrate Metabolite wikidata:Q207920
L-glutamate Metabolite wikidata:Q27104095
Baclofen Metabolite wikidata:Q413717
GABA Metabolite wikidata:Q210021
succinate Metabolite wikidata:Q213050
benzodiazepines Metabolite wikidata:Q83871
calcium influx Metabolite wikidata:Q23905776
Cl- Metabolite wikidata:Q108200
succinic semialdehyde Metabolite wikidata:Q4602542
Barbiturates Metabolite wikidata:Q206348
GABA Metabolite wikidata:Q210021
GABA Metabolite wikidata:Q210021
release of GABA Metabolite wikidata:Q210021
GABA Metabolite wikidata:Q210021
GABA Metabolite wikidata:Q210021
gamma-hydroxybutyrate Metabolite wikidata:Q207920
succinate Metabolite wikidata:Q213050
succinic semialdehyde Metabolite wikidata:Q4602542
GABA Metabolite wikidata:Q210021
Cl- Metabolite wikidata:Q108200
Cl- Metabolite wikidata:Q108200
Cl- Metabolite wikidata:Q108200
Cl- Metabolite wikidata:Q108200
DNM1 GeneProduct wikidata:Q1181014
ALDH9A1 GeneProduct ensembl:ENSG00000143149
AP2A1 GeneProduct ensembl:ENSG00000196961
GPHN GeneProduct ensembl:ENSG00000171723
AP2A2 GeneProduct ncbigene:161
SLC32A1 GeneProduct ensembl:ENSG00000101438
GABARAP GeneProduct wikidata:Q18036482
UBQLN1 GeneProduct wikidata:Q18039745
AP2S1 GeneProduct ensembl:ENSG00000042753
GAT1 GeneProduct uniprot:P30531
NSF GeneProduct wikidata:Q6951477
ABAT GeneProduct wikidata:Q18300885
AP2M1 GeneProduct ensembl:ENSG00000161203
GAD2 GeneProduct uniprot:Q05329
SLC6A11 GeneProduct ensembl:ENSG00000132164
GAD1 GeneProduct uniprot:Q99259
AP2B1 GeneProduct ensembl:ENSG00000006125
ALDH9A1 GeneProduct ensembl:ENSG00000143149
ABAT GeneProduct wikidata:Q18300885
GABARAP GeneProduct wikidata:Q18036482
NSF GeneProduct wikidata:Q6951477
UBQLN1 GeneProduct wikidata:Q18039745
GPHN GeneProduct ensembl:ENSG00000171723
GABARAP GeneProduct wikidata:Q18036482
GABRE Protein ensembl:ENSG00000102287
GABRG2 Protein ensembl:ENSG00000113327
GABRP Protein ensembl:ENSG00000094755
GABRQ Protein ensembl:ENSG00000268089
GABRG1 Protein ensembl:ENSG00000163285
GAD Protein eccode:4.1.1.15 glutamic acid decarboxylase
GABRA1 Protein ensembl:ENSG00000022355
GABRD Protein ensembl:ENSG00000187730
G-protein (large Heterotrimeric) Protein eccode:3.6.5.1 guanine nucleotide-binding proteins
GABA-B-receptor Protein uniprot:Q9UBS5
VIAAT Protein uniprot:Q9H598 Vesicular inhibitory amino acid transporter
Ca2+ channel Protein wikidata:Q246819
K+ channel Protein wikidata:Q423778
GABRB2 Protein ensembl:ENSG00000145864
GABRB3 Protein ensembl:ENSG00000166206
G-protein (small monomeric Small GTPase) Protein eccode:3.6.5.2 guanine nucleotide-binding proteins
ALDH4 Protein uniprot:P49189 4-trimethylaminobutyraldehyde dehydrogenase
GABRB1 Protein ensembl:ENSG00000163288
adenylate cyclase Protein wikidata:Q356257
ABAT Protein uniprot:P80404 4-Aminobutyrate aminotransferase
GABRG3 Protein ensembl:ENSG00000182256
GAT3 Protein uniprot:P48066
ALDH4 Protein uniprot:P49189 4-trimethylaminobutyraldehyde dehydrogenase
ABAT Protein uniprot:P80404 4-Aminobutyrate aminotransferase
GABA-B-receptor (sub.1) Protein uniprot:Q9UBS5
GABA-B-receptor (sub.2) Protein uniprot:O75899
GABA-B-receptor (sub.1) Protein uniprot:Q9UBS5
GABA-B-receptor (sub.2) Protein uniprot:O75899
GABRA3 Protein ensembl:ENSG00000011677
GABRA5 Protein ensembl:ENSG00000186297
GABRA2 Protein ensembl:ENSG00000151834
GABRA4 Protein ensembl:ENSG00000109158
GABRA6 Protein uniprot:Q16445

References