Biochemical pathways: part I (WP3604)
Homo sapiens
This is a representation of the “Biochemical Pathways Part I” map provided by Roche and edited by Gerhard Michal. It exclusively represents metabolites of mammalian pathways. This pathway might be used to get a first impression of changes in primary metabolic pathways in metabolomics datasets.
For a description of pathway objects, see the WikiPathways Legend.
Authors
Pieter Giesbertz , Egon Willighagen , Denise Slenter , Dr Luis Alberto Lightbourn P D , Friederike Ehrhart , and Eric WeitzActivity
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Cited In
- WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research (2018).
- Discovering life's directed metabolic (sub)paths to interpret human biochemical markers using the DSMN tool.
- Extending inherited metabolic disorder diagnostics with biomarker interaction visualizations (2023).
- Description of metabolic differences between castrated males and intact gilts obtained from high-throughput metabolomics of porcine plasma (2025).
Are you planning to include this pathway in your next publication? See How to Cite and add a link here to your paper once it's online.
Organisms
Homo sapiensCommunities
ONTOXAnnotations
Pathway Ontology
classic metabolic pathway| Label | Type | Compact URI | Comment |
|---|---|---|---|
| Succinic acid | Metabolite | hmdb:HMDB0000254 | |
| Indolepyruvic acid | Metabolite | chebi:29750 | |
| Glycolic acid | Metabolite | hmdb:HMDB0000115 | |
| Oxalacetic acid | Metabolite | hmdb:HMDB0000223 | |
| L-Glutamic acid | Metabolite | hmdb:HMDB0000148 | |
| Glyoxylic acid | Metabolite | hmdb:HMDB0000119 | |
| cis-Aconitic acid | Metabolite | hmdb:HMDB0000072 | |
| D-threo-Isocitric acid | Metabolite | hmdb:HMDB0001874 | |
| Oxalosuccinic acid | Metabolite | hmdb:HMDB0003974 | |
| Citric acid | Metabolite | hmdb:HMDB0000094 | |
| Oxoglutaric acid | Metabolite | hmdb:HMDB0000208 | |
| Succinyl-CoA | Metabolite | hmdb:HMDB0001022 | |
| L-Malic acid | Metabolite | hmdb:HMDB0000156 | |
| L-2-Amino-3-oxobutanoic acid | Metabolite | hmdb:HMDB0006454 | |
| Fumaric acid | Metabolite | hmdb:HMDB0000134 | |
| 5-Aminolevulinic acid | Metabolite | hmdb:HMDB0001149 | |
| Oxalic acid | Metabolite | hmdb:HMDB0002329 | |
| Acetyl-CoA | Metabolite | hmdb:HMDB0001206 | |
| Porphobilinogen | Metabolite | hmdb:HMDB0000245 | |
| 4-Aminobutyraldehyde | Metabolite | hmdb:HMDB0001080 | |
| Gamma-Aminobutyric acid | Metabolite | hmdb:HMDB0000112 | |
| Succinic acid semialdehyde | Metabolite | hmdb:HMDB0001259 | |
| Pyrroline hydroxycarboxylic acid | Metabolite | hmdb:HMDB0001369 | |
| 4-Hydroxy-L-proline | Metabolite | hmdb:HMDB0006055 | |
| L-Proline | Metabolite | hmdb:HMDB0000162 | |
| 1-Pyrroline-5-carboxylic acid | Metabolite | hmdb:HMDB0001301 | |
| L-Glutamine | Metabolite | hmdb:HMDB0000641 | |
| 1-Pyrroline-2-carboxylic acid | Metabolite | hmdb:HMDB0006875 | |
| S-Lactoylglutathione | Metabolite | hmdb:HMDB0001066 | |
| L-Glutamic acid 5-phosphate | Metabolite | hmdb:HMDB0001228 | |
| L-Arginine | Metabolite | hmdb:HMDB0000517 | |
| Argininosuccinic acid | Metabolite | hmdb:HMDB0000052 | |
| L-Aspartic acid | Metabolite | hmdb:HMDB0000191 | |
| D-Proline | Metabolite | hmdb:HMDB0003411 | |
| Spermidine | Metabolite | hmdb:HMDB0001257 | |
| Putrescine | Metabolite | hmdb:HMDB0001414 | |
| Urea | Metabolite | hmdb:HMDB0000294 | |
| Ornithine | Metabolite | hmdb:HMDB0000214 | |
| Citrulline | Metabolite | hmdb:HMDB0000904 | |
| Carbamoylphosphate | Metabolite | hmdb:HMDB0001096 | |
| Orotic acid | Metabolite | hmdb:HMDB0000226 | |
| 4,5-Dihydroorotic acid | Metabolite | hmdb:HMDB0000528 | |
| Ureidosuccinic acid | Metabolite | hmdb:HMDB0000828 | |
| Spermine | Metabolite | hmdb:HMDB0001256 | |
| Fructose 6-phosphate | Metabolite | hmdb:HMDB0000124 | |
| Glutathione | Metabolite | hmdb:HMDB0000125 | |
| Oxidized glutathione | Metabolite | hmdb:HMDB0003337 | |
| Gamma-Glutamylcysteine | Metabolite | hmdb:HMDB0001049 | |
| L-Cysteine | Metabolite | hmdb:HMDB0000574 | |
| D-2-Hydroxyglutaric acid | Metabolite | hmdb:HMDB0000606 | |
| Phosphoenolpyruvic acid | Metabolite | hmdb:HMDB0000263 | |
| Pyruvic acid | Metabolite | hmdb:HMDB0000243 | |
| Glutaryl-CoA | Metabolite | hmdb:HMDB0001339 | |
| L-Histidine | Metabolite | hmdb:HMDB0000177 | |
| Uric acid | Metabolite | hmdb:HMDB0000289 | |
| Glycine | Metabolite | hmdb:HMDB0000123 | |
| Hydroxypyruvic acid | Metabolite | hmdb:HMDB0001352 | |
| L-Alanine | Metabolite | hmdb:HMDB0000161 | |
| L-Lactic acid | Metabolite | hmdb:HMDB0000190 | |
| 2-Phospho-D-glyceric acid | Metabolite | hmdb:HMDB0003391 | |
| 3-Phosphoglyceric acid | Metabolite | hmdb:HMDB0000807 | |
| Glyceric acid 1,3-biphosphate | Metabolite | hmdb:HMDB0001270 | |
| Glyceric acid | Metabolite | hmdb:HMDB0000139 | |
| L-Asparagine | Metabolite | hmdb:HMDB0000168 | |
| Fructose 1,6-bisphosphate | Metabolite | hmdb:HMDB0001058 | |
| D-Glyceraldehyde 3-phosphate | Metabolite | hmdb:HMDB0001112 | |
| Aminoacetone | Metabolite | hmdb:HMDB0002134 | |
| Pyruvaldehyde | Metabolite | hmdb:HMDB0001167 | |
| Glucose 6-phosphate | Metabolite | hmdb:HMDB0001401 | |
| Glucose 1-phosphate | Metabolite | hmdb:HMDB0001586 | |
| Uridine diphosphate glucose | Metabolite | hmdb:HMDB0000286 | |
| Alpha-D-Glucose 1,6-bisphosphate | Metabolite | hmdb:HMDB0003514 | |
| GDP-glucose | Metabolite | hmdb:HMDB0003351 | |
| Uridine diphosphate glucuronic acid | Metabolite | hmdb:HMDB0000935 | |
| D-Glucuronic acid 1-phosphate | Metabolite | hmdb:HMDB0003976 | |
| D-Glucuronic acid | Metabolite | hmdb:HMDB0000127 | |
| Gulonic acid | Metabolite | hmdb:HMDB0003290 | |
| L-Gulonolactone | Metabolite | hmdb:HMDB0003466 | |
| 5'-Phosphoribosyl-N-formylglycinamide | Metabolite | hmdb:HMDB0001308 | |
| D-Ribose 5-phosphate | Metabolite | hmdb:HMDB0001548 | |
| D-Sedoheptulose 7-phosphate | Metabolite | hmdb:HMDB0001068 | |
| Xylulose 5-phosphate | Metabolite | hmdb:HMDB0000868 | |
| D-Ribulose 5-phosphate | Metabolite | hmdb:HMDB0000618 | |
| 6-Phosphogluconic acid | Metabolite | hmdb:HMDB0001316 | |
| D-Ribulose | Metabolite | hmdb:HMDB0000621 | |
| D-Ribose | Metabolite | hmdb:HMDB0000283 | |
| Phosphoribosyl pyrophosphate | Metabolite | hmdb:HMDB0000280 | |
| 5-Phosphoribosylamine | Metabolite | hmdb:HMDB0001128 | |
| Glycineamideribotide | Metabolite | hmdb:HMDB0002022 | |
| 5'-phosphoribosyl-a-N-formylglycineamidine | Metabolite | hmdb:HMDB0002305 | |
| AICAR | Metabolite | hmdb:HMDB0001517 | |
| SAICAR | Metabolite | hmdb:HMDB0000797 | |
| 5-Aminoimidazole ribonucleotide | Metabolite | hmdb:HMDB0001235 | |
| Phosphoribosyl formamidocarboxamide | Metabolite | hmdb:HMDB0001439 | |
| Inosinic acid | Metabolite | hmdb:HMDB0000175 | |
| Inosine | Metabolite | hmdb:HMDB0000195 | |
| Xanthosine | Metabolite | hmdb:HMDB0000299 | |
| Hypoxanthine | Metabolite | hmdb:HMDB0000157 | |
| Xanthine | Metabolite | hmdb:HMDB0000292 | |
| Adenylsuccinic acid | Metabolite | hmdb:HMDB0000536 | |
| Adenosine monophosphate | Metabolite | hmdb:HMDB0000045 | |
| Adenosine | Metabolite | hmdb:HMDB0000050 | |
| Adenine | Metabolite | hmdb:HMDB0000034 | |
| Guanosine | Metabolite | hmdb:HMDB0000133 | |
| Guanine | Metabolite | hmdb:HMDB0000132 | |
| Guanosine monophosphate | Metabolite | hmdb:HMDB0001397 | |
| Xanthylic acid | Metabolite | hmdb:HMDB0001554 | |
| Guanosine diphosphate | Metabolite | hmdb:HMDB0001201 | |
| Allantoin | Metabolite | hmdb:HMDB0000462 | |
| Allantoic acid | Metabolite | hmdb:HMDB0001209 | |
| Guanosine triphosphate | Metabolite | hmdb:HMDB0001273 | |
| 2'-Deoxyguanosine 5'-monophosphate | Metabolite | hmdb:HMDB0001044 | |
| (S)-Ureidoglycolic acid | Metabolite | hmdb:HMDB0001005 | |
| dGDP | Metabolite | hmdb:HMDB0000960 | |
| dGTP | Metabolite | hmdb:HMDB0001440 | |
| Deoxyguanosine | Metabolite | hmdb:HMDB0000085 | |
| Adenosine 3',5'-diphosphate | Metabolite | hmdb:HMDB0000061 | |
| Adenosine triphosphate | Metabolite | hmdb:HMDB0000538 | |
| dATP | Metabolite | hmdb:HMDB0001532 | |
| dADP | Metabolite | hmdb:HMDB0001508 | |
| Deoxyadenosine monophosphate | Metabolite | hmdb:HMDB0000905 | |
| Deoxyadenosine | Metabolite | hmdb:HMDB0000101 | |
| 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate | Metabolite | hmdb:HMDB0006273 | |
| Urocanic acid | Metabolite | hmdb:HMDB0000301 | |
| Histamine | Metabolite | hmdb:HMDB0000870 | |
| 1-Methylhistamine | Metabolite | hmdb:HMDB0000898 | |
| 4-Imidazolone-5-propionic acid | Metabolite | hmdb:HMDB0001014 | |
| Hydantoin-5-propionic acid | Metabolite | hmdb:HMDB0001212 | |
| Formiminoglutamic acid | Metabolite | hmdb:HMDB0000854 | |
| Carglumic acid | Metabolite | hmdb:HMDB0015673 | |
| 4-Hydroxyphenylpyruvic acid | Metabolite | hmdb:HMDB0000707 | |
| L-Tyrosine | Metabolite | hmdb:HMDB0000158 | |
| Phenylpyruvic acid | Metabolite | hmdb:HMDB0000205 | |
| L-Phenylalanine | Metabolite | hmdb:HMDB0000159 | |
| Homogentisic acid | Metabolite | hmdb:HMDB0000130 | |
| Maleylacetoacetic acid | Metabolite | hmdb:HMDB0002052 | |
| 4-Fumarylacetoacetic acid | Metabolite | hmdb:HMDB0001268 | |
| Acetoacetic acid | Metabolite | hmdb:HMDB0000060 | |
| 3,5-Diiodo-L-tyrosine | Metabolite | hmdb:HMDB0003474 | |
| Iodotyrosine | Metabolite | hmdb:HMDB0000021 | |
| Liothyronine | Metabolite | hmdb:HMDB0000265 | |
| Thyroxine | Metabolite | hmdb:HMDB0000248 | |
| L-Dopa | Metabolite | hmdb:HMDB0000181 | |
| Dopamine | Metabolite | hmdb:HMDB0000073 | |
| Norepinephrine | Metabolite | hmdb:HMDB0000216 | |
| Epinephrine | Metabolite | hmdb:HMDB0000068 | |
| Vanillylmandelic acid | Metabolite | hmdb:HMDB0000291 | |
| Dopaquinone | Metabolite | hmdb:HMDB0001229 | |
| Melanin | Metabolite | hmdb:HMDB0004068 | |
| L-Tryptophan | Metabolite | hmdb:HMDB0000929 | |
| 5-Hydroxy-L-tryptophan | Metabolite | hmdb:HMDB0000472 | |
| Serotonin | Metabolite | hmdb:HMDB0000259 | |
| 5-Hydroxyindoleacetaldehyde | Metabolite | hmdb:HMDB0004073 | |
| 5-Hydroxyindoleacetic acid | Metabolite | hmdb:HMDB0000763 | |
| Indoleacetic acid | Metabolite | hmdb:HMDB0000197 | |
| Indoleacetaldehyde | Metabolite | hmdb:HMDB0001190 | |
| Tryptamine | Metabolite | hmdb:HMDB0000303 | |
| N'-Formylkynurenine | Metabolite | hmdb:HMDB0001200 | |
| Oxoadipic acid | Metabolite | hmdb:HMDB0000225 | |
| L-Kynurenine | Metabolite | hmdb:HMDB0000684 | |
| L-3-Hydroxykynurenine | Metabolite | hmdb:HMDB0011631 | |
| 3-Hydroxyanthranilic acid | Metabolite | hmdb:HMDB0001476 | |
| Xanthurenic acid | Metabolite | hmdb:HMDB0000881 | |
| Kynurenic acid | Metabolite | hmdb:HMDB0000715 | |
| 2-Aminobenzoic acid | Metabolite | hmdb:HMDB0001123 | |
| 2-Amino-3-carboxymuconic acid semialdehyde | Metabolite | hmdb:HMDB0001330 | |
| Quinolinic acid | Metabolite | hmdb:HMDB0000232 | |
| 2-Aminomuconic acid semialdehyde | Metabolite | hmdb:HMDB0001280 | |
| Picolinic acid | Metabolite | hmdb:HMDB0002243 | |
| 2-Aminomuconic acid | Metabolite | hmdb:HMDB0001241 | |
| Aminoadipic acid | Metabolite | hmdb:HMDB0000510 | |
| Saccharopine | Metabolite | hmdb:HMDB0000279 | |
| L-Lysine | Metabolite | hmdb:HMDB0000182 | |
| N6-Acetyl-L-lysine | Metabolite | hmdb:HMDB0000206 | |
| 2-Keto-6-aminocaproate | Metabolite | hmdb:HMDB0012151 | |
| 2-Keto-6-acetamidocaproate | Metabolite | hmdb:HMDB0012150 | |
| D-1-Piperideine-2-carboxylic acid | Metabolite | hmdb:HMDB0001084 | |
| L-Pipecolic acid | Metabolite | hmdb:HMDB0000716 | |
| Glutaric acid | Metabolite | hmdb:HMDB0000661 | |
| Glutaconyl-CoA | Metabolite | hmdb:HMDB0001290 | |
| Crotonoyl-CoA | Metabolite | hmdb:HMDB0002009 | |
| Allysine | Metabolite | hmdb:HMDB0001263 | |
| 5-Hydroxylysine | Metabolite | hmdb:HMDB0000450 | |
| Galactosylhydroxylysine | Metabolite | hmdb:HMDB0000600 | |
| Hydroxymethylbilane | Metabolite | hmdb:HMDB0001137 | |
| Uroporphyrinogen I | Metabolite | hmdb:HMDB0002211 | |
| Uroporphyrinogen III | Metabolite | hmdb:HMDB0001086 | |
| Uroporphyrin III | Metabolite | hmdb:HMDB0000916 | |
| Coproporphyrinogen III | Metabolite | hmdb:HMDB0001261 | |
| Coproporphyrin III | Metabolite | hmdb:HMDB0000570 | |
| Protoporphyrinogen IX | Metabolite | hmdb:HMDB0001097 | |
| Coproporphyrinogen I | Metabolite | hmdb:HMDB0002158 | |
| Coproporphyrin I | Metabolite | hmdb:HMDB0000643 | |
| Uroporphyrin I | Metabolite | hmdb:HMDB0000936 | |
| Protoporphyrin IX | Metabolite | hmdb:HMDB0000241 | |
| Heme | Metabolite | hmdb:HMDB0003178 | |
| Adenosine phosphosulfate | Metabolite | hmdb:HMDB0001003 | |
| D-Lactic acid | Metabolite | hmdb:HMDB0001311 | |
| L-Threonine | Metabolite | hmdb:HMDB0000167 | |
| Acetaldehyde | Metabolite | hmdb:HMDB0000990 | |
| 2-Ketobutyric acid | Metabolite | hmdb:HMDB0000005 | |
| 2-Hydroxybutyric acid | Metabolite | hmdb:HMDB0000008 | |
| L-Homoserine | Metabolite | hmdb:HMDB0000719 | |
| N-acetyl-S-(3-oxo-3-carboxy-n-propyl)cysteine | Metabolite | hmdb:HMDB0002194 | |
| Homocysteine | Metabolite | hmdb:HMDB0000742 | |
| S-Adenosylhomocysteine | Metabolite | hmdb:HMDB0000939 | |
| S-Adenosylmethionine | Metabolite | hmdb:HMDB0001185 | |
| L-Methionine | Metabolite | hmdb:HMDB0000696 | |
| Methionine sulfoxide | Metabolite | hmdb:HMDB0002005 | |
| 3-Mercaptopyruvic acid | Metabolite | hmdb:HMDB0001368 | |
| L-Cystine | Metabolite | hmdb:HMDB0000192 | |
| Thiocysteine | Metabolite | hmdb:HMDB0003585 | |
| 3-Sulfinoalanine | Metabolite | hmdb:HMDB0000996 | |
| Hypotaurine | Metabolite | hmdb:HMDB0000965 | |
| Cysteic acid | Metabolite | hmdb:HMDB0002757 | |
| Taurine | Metabolite | hmdb:HMDB0000251 | |
| 3-Sulfinylpyruvic acid | Metabolite | hmdb:HMDB0001405 | |
| Sulfite | Metabolite | hmdb:HMDB0000240 | |
| Sulfate | Metabolite | hmdb:HMDB0001448 | |
| Phosphoadenosine phosphosulfate | Metabolite | hmdb:HMDB0001134 | |
| L-Serine | Metabolite | hmdb:HMDB0000187 | |
| O-Acetylserine | Metabolite | hmdb:HMDB0003011 | |
| R-Methylmalonyl-CoA | Metabolite | hmdb:HMDB0002255 | |
| S-Methylmalonyl-CoA | Metabolite | hmdb:HMDB0002310 | |
| Propionyl-CoA | Metabolite | hmdb:HMDB0001275 | |
| Propinol adenylate | Metabolite | hmdb:HMDB0006806 | |
| Propionic acid | Metabolite | hmdb:HMDB0000237 | |
| Acrylyl-CoA | Metabolite | hmdb:HMDB0002307 | |
| 3-Hydroxypropionyl-CoA | Metabolite | hmdb:HMDB0006807 | |
| Hydroxypropionic acid | Metabolite | hmdb:HMDB0000700 | |
| Malonic semialdehyde | Metabolite | hmdb:HMDB0011111 | |
| Malonic acid | Metabolite | hmdb:HMDB0000691 | |
| Malonyl-CoA | Metabolite | hmdb:HMDB0001175 | |
| L-4-Hydroxyglutamate semialdehyde | Metabolite | hmdb:HMDB0006556 | |
| 4-Hydroxy-L-glutamic acid | Metabolite | hmdb:HMDB0002273 | |
| 4-Hydroxy-2-oxoglutaric acid | Metabolite | hmdb:HMDB0002070 | |
| L-Glutamic-gamma-semialdehyde | Metabolite | hmdb:HMDB0002104 | |
| 5-Amino-2-oxopentanoic acid | Metabolite | hmdb:HMDB0006272 | |
| Phosphoguanidinoacetate | Metabolite | hmdb:HMDB0003705 | |
| Guanidoacetic acid | Metabolite | hmdb:HMDB0000128 | |
| Creatine | Metabolite | hmdb:HMDB0000064 | |
| Phosphocreatine | Metabolite | hmdb:HMDB0001511 | |
| Orotidylic acid | Metabolite | hmdb:HMDB0000218 | |
| Uridine 5'-monophosphate | Metabolite | hmdb:HMDB0000288 | |
| 1-Pyrroline-4-hydroxy-2-carboxylate | Metabolite | hmdb:HMDB0002234 | |
| allo-4-hydroxy-d-proline | Metabolite | pubchem.compound:440014 | |
| Pyrrole-2-carboxylic acid | Metabolite | hmdb:HMDB0004230 | |
| Uridine 5'-diphosphate | Metabolite | hmdb:HMDB0000295 | |
| Uridine triphosphate | Metabolite | hmdb:HMDB0000285 | |
| Uridine | Metabolite | hmdb:HMDB0000296 | |
| Uracil | Metabolite | hmdb:HMDB0000300 | |
| Cytidine | Metabolite | hmdb:HMDB0000089 | |
| Cytidine monophosphate | Metabolite | hmdb:HMDB0000095 | |
| Cytidine triphosphate | Metabolite | hmdb:HMDB0000082 | |
| CDP | Metabolite | hmdb:HMDB0001546 | |
| Cytosine | Metabolite | hmdb:HMDB0000630 | |
| Dihydrouracil | Metabolite | hmdb:HMDB0000076 | |
| Ureidopropionic acid | Metabolite | hmdb:HMDB0000026 | |
| Beta-Alanine | Metabolite | hmdb:HMDB0000056 | |
| Deoxyuridine triphosphate | Metabolite | hmdb:HMDB0001191 | |
| dUDP | Metabolite | hmdb:HMDB0001000 | |
| dUMP | Metabolite | hmdb:HMDB0001409 | |
| dCTP | Metabolite | hmdb:HMDB0000998 | |
| dCDP | Metabolite | hmdb:HMDB0001245 | |
| dCMP | Metabolite | hmdb:HMDB0001202 | |
| Thymidine 5'-triphosphate | Metabolite | hmdb:HMDB0001342 | |
| Thymidine | Metabolite | hmdb:HMDB0000273 | |
| Thymine | Metabolite | hmdb:HMDB0000262 | |
| Dihydrothymine | Metabolite | hmdb:HMDB0000079 | |
| Ureidoisobutyric acid | Metabolite | hmdb:HMDB0002031 | |
| (R)-b-aminoisobutyric acid | Metabolite | hmdb:HMDB0002299 | |
| dTDP | Metabolite | hmdb:HMDB0001274 | |
| 5-Thymidylic acid | Metabolite | hmdb:HMDB0001227 | |
| Deoxycytidine | Metabolite | hmdb:HMDB0000014 | |
| 5,10-Methylene-THF | Metabolite | hmdb:HMDB0001533 | |
| Dihydrofolic acid | Metabolite | hmdb:HMDB0001056 | |
| 3a,11b,21-Trihydroxy-20-oxo-5b-pregnan-18-al | Metabolite | hmdb:HMDB0006753 | |
| 11b,21-Dihydroxy-3,20-oxo-5b-pregnan-18-al | Metabolite | hmdb:HMDB0006754 | |
| Aldosterone | Metabolite | hmdb:HMDB0000037 | |
| 18-Hydroxycorticosterone | Metabolite | hmdb:HMDB0000319 | |
| Aldosterone hemiacetal | Metabolite | pubchem.compound:5461066 | |
| Corticosterone | Metabolite | hmdb:HMDB0001547 | |
| Deoxycorticosterone | Metabolite | hmdb:HMDB0000016 | |
| Progesterone | Metabolite | hmdb:HMDB0001830 | |
| Pregnenolone | Metabolite | hmdb:HMDB0000253 | |
| 21-Hydroxypregnenolone | Metabolite | hmdb:HMDB0004026 | |
| 17a-Hydroxypregnenolone | Metabolite | hmdb:HMDB0000363 | |
| Dehydroepiandrosterone | Metabolite | hmdb:HMDB0000077 | |
| 17-Hydroxyprogesterone | Metabolite | hmdb:HMDB0000374 | |
| Androstenedione | Metabolite | hmdb:HMDB0000053 | |
| Testosterone | Metabolite | hmdb:HMDB0000234 | |
| 19-Hydroxytestosterone | Metabolite | hmdb:HMDB0006769 | |
| Estradiol | Metabolite | hmdb:HMDB0000151 | |
| Estrone | Metabolite | hmdb:HMDB0000145 | |
| Estriol | Metabolite | hmdb:HMDB0000153 | |
| 2-Hydroxyestrone | Metabolite | hmdb:HMDB0000343 | |
| 2-Methoxyestrone | Metabolite | hmdb:HMDB0000010 | |
| 16a-Hydroxyestrone | Metabolite | hmdb:HMDB0000335 | |
| 16a-Hydroxyandrost-4-ene-3,17-dione | Metabolite | hmdb:HMDB0006774 | |
| 17a,21-Dihydroxy-5b-pregnane-3,11,20-trione | Metabolite | hmdb:HMDB0006758 | |
| 16a-hydroxydehydroepiandrosterone | Metabolite | pubchem.compound:102030 | |
| 5-androstenediol | Metabolite | pubchem.compound:10062826 | |
| Cortisol | Metabolite | hmdb:HMDB0000063 | |
| Cortisone | Metabolite | hmdb:HMDB0002802 | |
| Tetrahydrocortisone | Metabolite | hmdb:HMDB0000903 | |
| Cortolone | Metabolite | hmdb:HMDB0003128 | |
| Cortol | Metabolite | hmdb:HMDB0003180 | |
| Tetrahydrocortisol | Metabolite | hmdb:HMDB0000949 | |
| 11b,17a,21-Trihydroxy-5b-pregnane-3,20-dione | Metabolite | hmdb:HMDB0003259 | |
| 5-alpha-Dihydrotestosterone glucuronide | Metabolite | hmdb:HMDB0006203 | |
| 19-Hydroxyandrost-4-ene-3,17-dione | Metabolite | hmdb:HMDB0003955 | |
| 22b-Hydroxycholesterol | Metabolite | hmdb:HMDB0004035 | |
| Dehydroepiandrosterone sulfate | Metabolite | pubchem.compound:12594 | |
| Androstanedione | Metabolite | hmdb:HMDB0000899 | |
| Androsterone | Metabolite | hmdb:HMDB0000031 | |
| 20a,22b-Dihydroxycholesterol | Metabolite | hmdb:HMDB0006763 | |
| Cholesterol | Metabolite | hmdb:HMDB0000067 | |
| 7a-Hydroxycholesterol | Metabolite | hmdb:HMDB0001496 | |
| 17a,20a-Dihydroxycholesterol | Metabolite | hmdb:HMDB0006764 | |
| 7a-Hydroxy-cholestene-3-one | Metabolite | hmdb:HMDB0001993 | |
| 3a,7a,12a-Trihydroxy-5b-cholestanoic acid | Metabolite | hmdb:HMDB0003873 | |
| 7a,12a-Dihydroxy-cholestene-3-one | Metabolite | hmdb:HMDB0002197 | |
| 7a,12a-Dihydroxy-5b-cholestan-3-one | Metabolite | hmdb:HMDB0006887 | |
| 3a,7a,12a,24-Tetrahydroxy-5b-cholestanoyl-CoA | Metabolite | hmdb:HMDB0006890 | |
| 27-Deoxy-5b-cyprinol | Metabolite | hmdb:HMDB0001231 | |
| Choloyl-CoA | Metabolite | hmdb:HMDB0001374 | |
| Cholic acid | Metabolite | hmdb:HMDB0000619 | |
| Taurocholic acid | Metabolite | hmdb:HMDB0000036 | |
| Glycocholic acid | Metabolite | hmdb:HMDB0000138 | |
| 5b-Cyprinol sulfate | Metabolite | hmdb:HMDB0006888 | |
| 7a-Hydroxy-5b-cholestan-3-one | Metabolite | hmdb:HMDB0006892 | |
| scymnol sulfate | Metabolite | chebi:50107 | |
| 3a,7a-Dihydroxy-5b-cholestane | Metabolite | hmdb:HMDB0006893 | |
| Chenodeoxycholic acid | Metabolite | hmdb:HMDB0000518 | |
| Desmosterol | Metabolite | hmdb:HMDB0002719 | |
| 7-Dehydrocholesterol | Metabolite | hmdb:HMDB0000032 | |
| Lathosterol | Metabolite | hmdb:HMDB0001170 | |
| Zymosterol intermediate 2 | Metabolite | hmdb:HMDB0006271 | |
| Lanosterin | Metabolite | hmdb:HMDB0001251 | |
| (S)-2,3-Epoxysqualene | Metabolite | hmdb:HMDB0001188 | |
| Squalene | Metabolite | hmdb:HMDB0000256 | |
| Farnesyl pyrophosphate | Metabolite | hmdb:HMDB0000961 | |
| Geranyl-PP | Metabolite | hmdb:HMDB0001285 | |
| Isopentenyl pyrophosphate | Metabolite | hmdb:HMDB0001347 | |
| 5-Diphosphomevalonic acid | Metabolite | hmdb:HMDB0001090 | |
| Mevalonic acid-5P | Metabolite | hmdb:HMDB0001343 | |
| Mevalonic acid | Metabolite | hmdb:HMDB0000227 | |
| 3-Hydroxy-3-methylglutaryl-CoA | Metabolite | hmdb:HMDB0001375 | |
| Coenzyme A | Metabolite | hmdb:HMDB0001423 | |
| Dephospho-CoA | Metabolite | hmdb:HMDB0001373 | |
| Pantetheine | Metabolite | hmdb:HMDB0003426 | |
| Pantetheine 4'-phosphate | Metabolite | hmdb:HMDB0001416 | |
| 4-Phosphopantothenoylcysteine | Metabolite | hmdb:HMDB0001117 | |
| Pantothenic acid | Metabolite | hmdb:HMDB0000210 | |
| Pantothenol | Metabolite | hmdb:HMDB0004231 | |
| D-4'-Phosphopantothenate | Metabolite | hmdb:HMDB0001016 | |
| 4,4-Dimethyl-5a-cholesta-8,24-dien-3-b-ol | Metabolite | hmdb:HMDB0001286 | |
| Vitamin D3 | Metabolite | hmdb:HMDB0000876 | |
| Ergocalciferol | Metabolite | hmdb:HMDB0000900 | |
| Ergosterol | Metabolite | hmdb:HMDB0000878 | |
| Calcitriol | Metabolite | hmdb:HMDB0001903 | |
| Pregnanediol | Metabolite | hmdb:HMDB0004025 | |
| Tetrahydrocorticosterone | Metabolite | hmdb:HMDB0000268 | |
| 11b,21-Dihydroxy-5b-pregnane-3,20-dione | Metabolite | hmdb:HMDB0006757 | |
| 11-Dehydrocorticosterone | Metabolite | hmdb:HMDB0004029 | |
| 3a-Hydroxy-5b-pregnane-20-one | Metabolite | hmdb:HMDB0006759 | |
| 21-Hydroxy-5b-pregnane-3,11,20-trione | Metabolite | hmdb:HMDB0006756 | |
| 3a,21-Dihydroxy-5b-pregnane-11,20-dione | Metabolite | hmdb:HMDB0006755 | |
| L-Valine | Metabolite | hmdb:HMDB0000883 | |
| Alpha-ketoisovaleric acid | Metabolite | hmdb:HMDB0000019 | |
| Isobutyryl-CoA | Metabolite | hmdb:HMDB0001243 | |
| Methacrylyl-CoA | Metabolite | hmdb:HMDB0001011 | |
| (S)-3-Hydroxyisobutyryl-CoA | Metabolite | hmdb:HMDB0001052 | |
| (S)-3-Hydroxyisobutyric acid | Metabolite | hmdb:HMDB0000023 | |
| (S)-Methylmalonic acid semialdehyde | Metabolite | hmdb:HMDB0002217 | |
| (S)-b-aminoisobutyric acid | Metabolite | hmdb:HMDB0002166 | |
| L-Isoleucine | Metabolite | hmdb:HMDB0000172 | |
| 3-Methyl-2-oxovaleric acid | Metabolite | hmdb:HMDB0000491 | |
| 2-Methylbutyryl-CoA | Metabolite | hmdb:HMDB0001041 | |
| Tiglyl-CoA | Metabolite | hmdb:HMDB0002054 | |
| 2-Methyl-3-hydroxybutyryl-CoA | Metabolite | hmdb:HMDB0001356 | |
| 2-Methylacetoacetyl-CoA | Metabolite | hmdb:HMDB0001157 | |
| L-Leucine | Metabolite | hmdb:HMDB0000687 | |
| Ketoleucine | Metabolite | hmdb:HMDB0000695 | |
| Isovaleryl-CoA | Metabolite | hmdb:HMDB0001113 | |
| 3-Methylcrotonyl-CoA | Metabolite | hmdb:HMDB0001493 | |
| 3-Hydroxyisovaleryl-CoA | Metabolite | hmdb:HMDB0006870 | |
| 3-Methylglutaconyl-CoA | Metabolite | hmdb:HMDB0001057 | |
| Phosphohydroxypyruvic acid | Metabolite | hmdb:HMDB0001024 | |
| Phosphoserine | Metabolite | hmdb:HMDB0000272 | |
| Fructose 1-phosphate | Metabolite | hmdb:HMDB0001076 | |
| Dihydroxyacetone phosphate | Metabolite | hmdb:HMDB0001473 | |
| Glycerol 3-phosphate | Metabolite | hmdb:HMDB0000126 | |
| Glycerol | Metabolite | hmdb:HMDB0000131 | |
| Glyceraldehyde | Metabolite | hmdb:HMDB0001051 | |
| D-Fructose | Metabolite | hmdb:HMDB0000660 | |
| D-Glucose | Metabolite | hmdb:HMDB0000122 | |
| D-Fructose 2,6-bisphosphate | Metabolite | hmdb:HMDB0001047 | |
| Mannose 6-phosphate | Metabolite | hmdb:HMDB0001078 | |
| D-Mannose | Metabolite | hmdb:HMDB0000169 | |
| Sorbitol | Metabolite | hmdb:HMDB0000247 | |
| Gluconolactone | Metabolite | hmdb:HMDB0000150 | |
| Gluconic acid | Metabolite | hmdb:HMDB0000625 | |
| 6-Phosphonoglucono-D-lactone | Metabolite | hmdb:HMDB0001127 | |
| D-Erythrose 4-phosphate | Metabolite | hmdb:HMDB0001321 | |
| D-Xylulose | Metabolite | hmdb:HMDB0001644 | |
| D-Xylitol | Metabolite | hmdb:HMDB0002917 | |
| D-Xylose | Metabolite | hmdb:HMDB0000098 | |
| L-Arabinose | Metabolite | hmdb:HMDB0000646 | |
| L-Arabitol | Metabolite | hmdb:HMDB0001851 | |
| 3-Dehydro-L-gulonate | Metabolite | hmdb:HMDB0006334 | |
| L-Xylulose | Metabolite | pubchem.compound:22253 | |
| Ascorbic acid | Metabolite | hmdb:HMDB0000044 | |
| Dehydroascorbic acid | Metabolite | hmdb:HMDB0001264 | |
| 2,3-Diketo-L-gulonate | Metabolite | hmdb:HMDB0006511 | |
| D-Glucurono-6,3-lactone | Metabolite | hmdb:HMDB0006355 | |
| L-Lyxonic acid | Metabolite | pubchem.compound:644110 | |
| Myo-inositol 1-phosphate | Metabolite | hmdb:HMDB0000213 | |
| Erythroascorbic acid | Metabolite | pubchem.compound:54675810 | |
| Glucaric acid | Metabolite | hmdb:HMDB0000663 | |
| Myoinositol | Metabolite | hmdb:HMDB0000211 | |
| Cellobiose | Metabolite | hmdb:HMDB0000055 | |
| Sucrose | Metabolite | hmdb:HMDB0000258 | |
| 1-Phosphatidyl-D-myo-inositol | Metabolite | hmdb:HMDB0006953 | |
| Galactose 1-phosphate | Metabolite | hmdb:HMDB0000645 | |
| Uridine diphosphategalactose | Metabolite | hmdb:HMDB0000302 | |
| D-Galactose | Metabolite | hmdb:HMDB0000143 | |
| Alpha-Lactose | Metabolite | hmdb:HMDB0000186 | |
| Amylose | Metabolite | hmdb:HMDB0003403 | |
| Amylopectin | Metabolite | hmdb:HMDB0003255 | |
| D-Maltose | Metabolite | hmdb:HMDB0000163 | |
| Choline | Metabolite | hmdb:HMDB0000097 | |
| Betaine aldehyde | Metabolite | hmdb:HMDB0001252 | |
| Betaine | Metabolite | hmdb:HMDB0000043 | |
| Dimethylglycine | Metabolite | hmdb:HMDB0000092 | |
| Sarcosine | Metabolite | hmdb:HMDB0000271 | |
| Acetylcholine | Metabolite | hmdb:HMDB0000895 | |
| Palmityl-CoA | Metabolite | hmdb:HMDB0001338 | |
| 3-Dehydrosphinganine | Metabolite | hmdb:HMDB0001480 | |
| Sphinganine | Metabolite | hmdb:HMDB0000269 | |
| Sphingosine | Metabolite | hmdb:HMDB0000252 | |
| Galactosylsphingosine | Metabolite | hmdb:HMDB0000648 | |
| Phosphorylcholine | Metabolite | hmdb:HMDB0001565 | |
| Citicoline | Metabolite | hmdb:HMDB0001413 | |
| 5,10-Methenyltetrahydrofolic acid | Metabolite | hmdb:HMDB0001354 | |
| N10-Formyl-THF | Metabolite | hmdb:HMDB0000972 | |
| N5-Formyl-THF | Metabolite | hmdb:HMDB0001562 | |
| 5-Methyltetrahydrofolic acid | Metabolite | hmdb:HMDB0001396 | |
| 5-Formiminotetrahydrofolic acid | Metabolite | hmdb:HMDB0001534 | |
| Tetrahydrofolic acid | Metabolite | hmdb:HMDB0001846 | |
| Ethanolamine | Metabolite | hmdb:HMDB0000149 | |
| O-Phosphoethanolamine | Metabolite | hmdb:HMDB0000224 | |
| CDP-Ethanolamine | Metabolite | hmdb:HMDB0001564 | |
| Glycerylphosphorylethanolamine | Metabolite | hmdb:HMDB0000114 | |
| Glucosamine 6-phosphate | Metabolite | hmdb:HMDB0001254 | |
| N-Acetyl-D-Glucosamine 6-Phosphate | Metabolite | hmdb:HMDB0001062 | |
| N-Acetyl-glucosamine 1-phosphate | Metabolite | hmdb:HMDB0001367 | |
| Glucosamine | Metabolite | hmdb:HMDB0001514 | |
| N-Acetyl-D-glucosamine | Metabolite | hmdb:HMDB0000215 | |
| Uridine diphosphate-N-acetylglucosamine | Metabolite | hmdb:HMDB0000290 | |
| Uridine diphosphate-N-acetylgalactosamine | Metabolite | hmdb:HMDB0000304 | |
| N-Acetyl-D-mannosamine | Metabolite | pubchem.compound:439281 | |
| N-Acetyl-D-mannosamine 6-phosphate | Metabolite | hmdb:HMDB0001121 | |
| Chitobiose | Metabolite | hmdb:HMDB0003556 | |
| N-Acetylneuraminate 9-phosphate | Metabolite | hmdb:HMDB0006268 | |
| Neuraminic acid | Metabolite | hmdb:HMDB0000830 | |
| Cortexolone | Metabolite | hmdb:HMDB0000015 | |
| Etiocholanedione | Metabolite | hmdb:HMDB0003769 | |
| Etiocholanolone | Metabolite | hmdb:HMDB0000490 | |
| (S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate | Metabolite | hmdb:HMDB0012130 |
References
- On representation of metabolic pathways. Michal G. Biosystems. 1998;47(1–2):1–7. PubMed Europe PMC Scholia