Urea cycle and metabolism of amino groups (WP3245)

Bos taurus

The urea cycle (also known as the ornithine cycle) is a cycle of biochemical reactions that produces urea ((NH2)2CO) from ammonia (NH3). This cycle occurs in ureotelic organisms. The urea cycle converts highly toxic ammonia to urea for excretion. This cycle was the first metabolic cycle to be discovered (Hans Krebs and Kurt Henseleit, 1932), five years before the discovery of the TCA cycle. The urea cycle takes place primarily in the liver and, to a lesser extent, in the kidneys. Amino acid catabolism results in waste ammonia. All animals need a way to excrete this product. Most aquatic organisms, or ammonotelic organisms, excrete ammonia without converting it. Ammonia is toxic, but upon excretion from aquatic species, it is diluted by the water outside the organism. Organisms that cannot easily and safely remove nitrogen as ammonia convert it to a less toxic substance such as urea or uric acid. The urea cycle mainly occurs in the liver. The urea produced by the liver is then released into the bloodstream where it travels to the kidneys and is ultimately excreted in urine.

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Authors

Martina Summer-Kutmon and Egon Willighagen

Activity

last edited

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Organisms

Bos taurus

Communities

Annotations

Pathway Ontology

urea cycle pathway

Participants

Label Type Compact URI Comment
L-Glutamate Metabolite cas:56-86-0 L-Glutamate
L-Glutamate 5-semialdehyde Metabolite kegg.compound:C01165
Phosphoguanidinoacetate Metabolite kegg.compound:C03166
L-Aspartate Metabolite kegg.compound:C00049
NH3 Metabolite kegg.compound:C00014
Urea Metabolite cas:57-13-6 Urea
Putrescine Metabolite cas:110-60-1 Putrescine
L-Ornithine Metabolite cas:70-26-8 L-Ornithine
Urea-1-carboxylate Metabolite kegg.compound:C01010
N-(L-Arginino)succinate Metabolite kegg.compound:C03406
Creatine Metabolite cas:57-00-1 Creatine
L-Proline Metabolite cas:147-85-3 L-Proline
L-Citrulline Metabolite cas:372-75-8 L-Citrulline
Arginine Metabolite cas:74-79-3 L-Arginine
Guanidinoacetate Metabolite kegg.compound:C00581
N2-Acetyl-L-ornithine Metabolite kegg.compound:C00437
Formaldehyde Metabolite cas:50-00-0 Formaldehyde
Sarcosine Metabolite cas:107-97-1 Sarcosine
Spermidine Metabolite cas:124-20-9 Spermidine
N-Acetyl-L-glutamate Metabolite kegg.compound:C00624
Spermine Metabolite cas:71-44-3 Spermine
Creatinine Metabolite cas:60-27-5 Creatinine
Carbamoyl Metabolite kegg.compound:C00169
N-Methylhydantoin Metabolite kegg.compound:C02565
Formate Metabolite kegg.compound:C00058
creatine-P Metabolite cas:57-00-1 Phosphocreatine
N-Acetyl-glutamate Metabolite kegg.compound:C00624
N-Carbamoylsarcosine Metabolite kegg.compound:C01043
CO₂ Metabolite kegg.compound:C00011
(S)-1-Pyrroline-5-carboxylate Metabolite kegg.compound:C03912
Fumarate Metabolite kegg.compound:C00122
ODC1 GeneProduct ensembl:ENSBTAG00000017924 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:4953
ALDH18A1 GeneProduct ensembl:ENSBTAG00000011832 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5832
SMS GeneProduct ensembl:ENSBTAG00000018382 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:6611
ACY1 GeneProduct ensembl:ENSBTAG00000032304 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:95
NAGS GeneProduct ensembl:ENSBTAG00000016249 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:162417
GAMT GeneProduct ensembl:ENSBTAG00000004112 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2593
ASL GeneProduct ensembl:ENSBTAG00000015314 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:435
ARG1 GeneProduct ensembl:ENSBTAG00000012403 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:383
OTC GeneProduct ensembl:ENSBTAG00000001488 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5009
CKM GeneProduct ensembl:ENSBTAG00000013921 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1158
OAT GeneProduct ensembl:ENSBTAG00000006928 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:4942
GLUD1 GeneProduct ensembl:ENSBTAG00000007540 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2746
CKB GeneProduct ensembl:ENSBTAG00000035998 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1152
ASS1 GeneProduct ensembl:ENSBTAG00000020747 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:445
CPS1 GeneProduct ensembl:ENSBTAG00000016662 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1373
GATM GeneProduct ensembl:ENSBTAG00000005586 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2628
SRM GeneProduct ensembl:ENSBTAG00000005304 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:6723
PYCR1 GeneProduct ensembl:ENSBTAG00000000042 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5831
ARG2 GeneProduct ensembl:ENSBTAG00000001945 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:384
PYCRL GeneProduct ensembl:ENSBTAG00000016810 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:65263

References