Glycolysis and gluconeogenesis (WP1567)

Mycobacterium tuberculosis

Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00679]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which often corresponds to operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003]. Source: KEGG (http://www.genome.jp/kegg-bin/show_pathway?map00010)

Authors

Kristina Hanspers , Alex Pico , Christine Chichester , Denise Slenter , Eric Weitz , and Egon Willighagen

Activity

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Organisms

Mycobacterium tuberculosis

Communities

Annotations

Pathway Ontology

glycolysis/gluconeogenesis pathway

Participants

Label Type Compact URI Comment
beta-D-fructose-(1,6)PP Metabolite kegg.compound:C05378
Acetate Metabolite kegg.compound:C00033
D-Glyceraldehyde 3-phosphate Metabolite kegg.compound:C00118
Pyruvate Metabolite kegg.compound:C00022
(1,3)-diPhospho-D-glyceroyl Metabolite kegg.compound:C00236
2-(alpha-Hydroxyethyl)thiamine diphosphate Metabolite kegg.compound:C05125
Glycerone phosphate Metabolite kegg.compound:C00111
beta-D-fructose-6P Metabolite kegg.compound:C05345
Enzyme N6-(dihydrolipoyl)lysine Metabolite kegg.compound:C15973
[Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine Metabolite kegg.compound:C16255
Enzyme N6-(lipoyl)lysine Metabolite kegg.compound:C15972
Phosphoenolpyruvate Metabolite kegg.compound:C00074
alpha-D-glucose-6P Metabolite kegg.compound:C00668
2-Phospho-D-glycerate Metabolite kegg.compound:C00631
Acetaldehyde Metabolite kegg.compound:C00084
Beta-D-Glucose 6-phosphate Metabolite kegg.compound:C01172
D-Glucose 1-phosphate Metabolite kegg.compound:C00103
Thiamin diphosphate Metabolite kegg.compound:C00068
3-Phospho-D-glycerate Metabolite kegg.compound:C00197
alpha-D-glucose Metabolite kegg.compound:C00267
beta-D-glucose Metabolite kegg.compound:C00221
Oxaloacetate Metabolite kegg.compound:C00036
Acetyl-CoA Metabolite kegg.compound:C00024
Ethanol Metabolite kegg.compound:C00469
pdhB GeneProduct myco.tuber:Rv2496c Original kegg element: gene;13;mtu:Rv0843 mtu:Rv2241 mtu:Rv2496c mtu:Rv2497c
ppgK GeneProduct myco.tuber:Rv2702 Original kegg element: gene;43;mtu:Rv2702
acs GeneProduct myco.tuber:Rv3667 Original kegg element: gene;91;mtu:Rv3667
adh GeneProduct myco.tuber:Rv1530 Original kegg element: gene;10;mtu:Rv0162c mtu:Rv0761c mtu:Rv1530 mtu:Rv1862
pykA GeneProduct eccode:2.7.1.40 Original kegg element: gene;17;mtu:Rv1617
adhB GeneProduct myco.tuber:Rv0761c Original kegg element: gene;10;mtu:Rv0162c mtu:Rv0761c mtu:Rv1530 mtu:Rv1862
adhD GeneProduct ncbiprotein:NP_217602 Original kegg element: gene;9;mtu:Rv3045
tpi GeneProduct eccode:5.3.1.1 Original kegg element: gene;23;mtu:Rv1438
pdhA GeneProduct myco.tuber:Rv2497c Original kegg element: gene;12;mtu:Rv0843 mtu:Rv2241 mtu:Rv2496c mtu:Rv2497c
adhA GeneProduct myco.tuber:Rv1862 Original kegg element: gene;10;mtu:Rv0162c mtu:Rv0761c mtu:Rv1530 mtu:Rv1862
lpdA GeneProduct myco.tuber:Rv3303c Original kegg element: gene;41;mtu:Rv0462 mtu:Rv0794c mtu:Rv3303c
aldC GeneProduct myco.tuber:Rv2858c Original kegg element: gene;2;mtu:Rv0147 mtu:Rv0458 mtu:Rv0768 mtu:Rv2858c
pdhB GeneProduct myco.tuber:Rv2496c Original kegg element: gene;12;mtu:Rv0843 mtu:Rv2241 mtu:Rv2496c mtu:Rv2497c
eno GeneProduct eccode:4.2.1.11 Original kegg element: gene;19;mtu:Rv1023
oxidoreductase GeneProduct myco.tuber:Rv0794c Original kegg element: gene;41;mtu:Rv0462 mtu:Rv0794c mtu:Rv3303c
aldehyde dehydrogenase (EC:1.2.1.-) GeneProduct myco.tuber:Rv0147 Original kegg element: gene;2;mtu:Rv0147 mtu:Rv0458 mtu:Rv0768 mtu:Rv2858c
gap GeneProduct eccode:1.2.1.12 Original kegg element: gene;21;mtu:Rv1436
aceE GeneProduct myco.tuber:Rv2241 Original kegg element: gene;13;mtu:Rv0843 mtu:Rv2241 mtu:Rv2496c mtu:Rv2497c
sugar kinase (EC:2.7.1.2) GeneProduct eccode:2.7.1.2 Original kegg element: gene;35;mtu:Rv0650
pgk GeneProduct eccode:2.7.2.3 Original kegg element: gene;42;mtu:Rv1437
pdhA GeneProduct myco.tuber:Rv2497c Original kegg element: gene;13;mtu:Rv0843 mtu:Rv2241 mtu:Rv2496c mtu:Rv2497c
pgi GeneProduct myco.tuber:Rv0946c Original kegg element: gene;29;mtu:Rv0946c
phosphoglycerate mutase (phosphoglyceromutase) (EC:5.4.2.1) GeneProduct eccode:5.4.2.1 Original kegg element: gene;20;mtu:Rv0489 mtu:Rv2419c mtu:Rv3214
lpd GeneProduct myco.tuber:Rv0462 Original kegg element: gene;41;mtu:Rv0462 mtu:Rv0794c mtu:Rv3303c
fba GeneProduct eccode:4.1.2.13 Original kegg element: gene;1;mtu:Rv0363c
aldA GeneProduct myco.tuber:Rv0768 Original kegg element: gene;2;mtu:Rv0147 mtu:Rv0458 mtu:Rv0768 mtu:Rv2858c
pgmA GeneProduct eccode:5.4.2.2 Original kegg element: gene;28;mtu:Rv3068c mtu:Rv3257c
aldehyde dehydrogenase (EC:1.2.1.3) GeneProduct myco.tuber:Rv0458 Original kegg element: gene;2;mtu:Rv0147 mtu:Rv0458 mtu:Rv0768 mtu:Rv2858c
dehydrogenase GeneProduct myco.tuber:Rv0843 Original kegg element: gene;13;mtu:Rv0843 mtu:Rv2241 mtu:Rv2496c mtu:Rv2497c
dehydrogenase GeneProduct myco.tuber:Rv0843 Original kegg element: gene;12;mtu:Rv0843 mtu:Rv2241 mtu:Rv2496c mtu:Rv2497c
adhE1 GeneProduct myco.tuber:Rv0162c Original kegg element: gene;10;mtu:Rv0162c mtu:Rv0761c mtu:Rv1530 mtu:Rv1862
sugar kinase (EC:2.7.-.-) GeneProduct myco.tuber:Rv0650 Original kegg element: gene;31;mtu:Rv0650
glpX GeneProduct eccode:3.1.3.11 Original kegg element: gene;25;mtu:Rv1099c
pdhC GeneProduct myco.tuber:Rv2495c Original kegg element: gene;14;mtu:Rv2495c
ppgK GeneProduct myco.tuber:Rv2702 Original kegg element: gene;44;mtu:Rv2702
pckA GeneProduct myco.tuber:Rv0211 Original kegg element: gene;76;mtu:Rv0211
aceE GeneProduct myco.tuber:Rv2241 Original kegg element: gene;12;mtu:Rv0843 mtu:Rv2241 mtu:Rv2496c mtu:Rv2497c
pfkB Protein ncbiprotein:NP_216545 Original kegg element: gene;24;mtu:Rv2029c mtu:Rv3010c
pfkA Protein ncbiprotein:NP_217526 Original kegg element: gene;24;mtu:Rv2029c mtu:Rv3010c

References

  1. Two enzymes with redundant fructose bisphosphatase activity sustain gluconeogenesis and virulence in Mycobacterium tuberculosis. Ganapathy U, Marrero J, Calhoun S, Eoh H, de Carvalho LPS, Rhee K, et al. Nat Commun. 2015 Aug 10;6:7912. PubMed Europe PMC Scholia