ID signaling pathway (WP1052)

Bos taurus

The Inhibitor of DNA binding (ID) proteins belong to the class V HLH family of transcription factors. Four ID proteins (ID 1-4)are known in humans. Unlike the basic HLH (bHLH) transcription factors, ID proteins lack the basic DNA binding region. They can heterodimerize with class I bHLH transcription factors to form inactive complexes. They thus act as dominant negative inhibitors of the class I bHLH transcription factors. They are also capable of regulating the activity of class II HLH transcription factors. Since, class I and II HLH proteins regulate the expression of cell type-specific genes and differentiated phenotype, ID proteins are thought to regulate the cross-talk between the pathways involved in cell growth and differentiation. Aberrant expression of ID proteins are found in many primary tumors and are found to regulate many steps in cancer progression including neo-angiogenesis, invasion and migration, proliferation and growth, cell-cell interaction and differentiation. These include head and neck squamous cell carcinoma, esophageal squamous cell carcinoma, melanoma, hepatocellular carcinonoma, pancreatic cancer, ovarian cancer, cervical cancer, breast cancer and prostate cancer. Among the transcription factors that ID proteins associate with are the Ets family members (ELKs) and paired box family (PAXs). They can also bind to the retinoblastoma and retinoblastoma-like proteins (RBLs), which are thought to be tumor suppressors. IDs can also be phosphorylated by CDK2. Please access this pathway at [http://www.netpath.org/netslim/id_pathway.html NetSlim] database. If you use this pathway, please cite the following paper: Kandasamy, K., Mohan, S. S., Raju, R., Keerthikumar, S., Kumar, G. S. S., Venugopal, A. K., Telikicherla, D., Navarro, J. D., Mathivanan, S., Pecquet, C., Gollapudi, S. K., Tattikota, S. G., Mohan, S., Padhukasahasram, H., Subbannayya, Y., Goel, R., Jacob, H. K. C., Zhong, J., Sekhar, R., Nanjappa, V., Balakrishnan, L., Subbaiah, R., Ramachandra, Y. L., Rahiman, B. A., Prasad, T. S. K., Lin, J., Houtman, J. C. D., Desiderio, S., Renauld, J., Constantinescu, S. N., Ohara, O., Hirano, T., Kubo, M., Singh, S., Khatri, P., Draghici, S., Bader, G. D., Sander, C., Leonard, W. J. and Pandey, A. (2010). NetPath: A public resource of curated signal transduction pathways. Genome Biology. 11:R3.

Authors

Alex Pico , Christine Chichester , Zahra Roudbari , Martina Summer-Kutmon , and Egon Willighagen

Activity

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Organisms

Bos taurus

Communities

Annotations

Pathway Ontology

signaling pathway Inhibitor of DNA binding signaling pathway

Participants

Label Type Compact URI Comment
RBL1 Protein ensembl:ENSBTAG00000011541 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5933
RB1 Protein ensembl:ENSBTAG00000006640 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5925
ELK3 Protein ensembl:ENSBTAG00000001509 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2004
PAX5 Protein ensembl:ENSBTAG00000012498 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5079
MYOD1 Protein ensembl:ENSBTAG00000002216 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:4654
PAX8 Protein ensembl:ENSBTAG00000019354 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:7849
ELK1 Protein ensembl:ENSBTAG00000015817 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2002
RBL2 Protein ensembl:ENSBTAG00000016243 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5934
ID3 Protein ensembl:ENSBTAG00000030425 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:3399
ELK4 Protein ensembl:ENSBTAG00000004953 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2005
CCNE1 Protein ensembl:ENSBTAG00000004735 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:898
PAX2 Protein ensembl:ENSBTAG00000021566 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5076
CDK2 Protein ensembl:ENSBTAG00000004021 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1017
SREBF1 Protein ensembl:ENSBTAG00000007884 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:6720
ID2 Protein ensembl:ENSBTAG00000021187 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:3398
ID1 Protein ensembl:ENSBTAG00000016169 HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:3397

References

  1. NetPath: a public resource of curated signal transduction pathways. Kandasamy K, Mohan SS, Raju R, Keerthikumar S, Kumar GSS, Venugopal AK, et al. Genome Biol. 2010 Jan 12;11(1):R3. PubMed Europe PMC Scholia