lipidmaps-wp-curation

WikiPathways WP143

• WikiPathways: WP143 (classic)
• Species: Homo sapiens
• Scholia: WP143
• WPRDF file: wp/Human/WP143.ttl
• GPMLRDF file: wp/gpml/Human/WP143.ttl
• SBML file: sbml/WP143.sbml (SVG) (conversion notes)

Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 5 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 5 tests OK!
• GeneralTests: all 15 tests OK!
• HMDBMetabolitesTests: all 1 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests: all 9 tests OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests
  • retiredIdentifiers: .. all OK!
  • onlyLIPIDMAPS: .x we found 1 problem(s):
    • Expected a LIPID MAPS identifier, but found other identifiers: 35
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 9 tests OK!
• PathwayTests: all 11 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 14 tests OK!

Summary

• Number of test classes: 21
• Number of tests: 120
• Number of assertions: 241
• Number of fails: 1

Fails

Only LIPID MAPS identifiers

Expected a LIPID MAPS identifier, but found other identifiers: 35

http://classic.wikipathways.org/instance/WP143_rr137128 3-Oxododexanoyl-CoA has 11966169 from PubChem-compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Acetoacetyl-CoA has 1420-36-6 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Linoleoyl-CoA has 40757-80-0 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Glycerol has 56-81-5 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Dihydroxyacetone Phosphate has 57-04-5 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Glyceraldehyde-3-Phosphate has 591-57-1 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Lauroyl-CoA has 6244-92-4 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Acetyl-CoA has 72-89-9 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Glutarate has 743 from PubChem-compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Trans-Dec-2-enoyl-CoA has CHEBI:10723 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 (S)-3-Hydroxybutanoyl-CoA has CHEBI:15453 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 2-trans-dodecenoyl-CoA has CHEBI:15471 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 3-Oxopalmitoyl-CoA has CHEBI:15491 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Butanoyl-CoA has CHEBI:15517 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Glutaryl-CoA has CHEBI:15524 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Palmitoyl-CoA has CHEBI:15525 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Myristoyl-CoA has CHEBI:15532 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 L-Glycerol-3-Phosphate has CHEBI:15978 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Triacylglycerol has CHEBI:17855 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Acyl-CoA has CHEBI:17984 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 (S)-3-Hydroxyhexadecanoyl-CoA has CHEBI:27402 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 (S)-3-Hydroxytetradecanoyl-CoA has CHEBI:27466 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Trans-Oct-2-enoyl-CoA has CHEBI:27537 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Hexanoyl-CoA has CHEBI:27540 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 3-Oxohexanoyl-CoA has CHEBI:27648 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 cis,cis-3,6-Dodecadienoyl-CoA has CHEBI:28002 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 3-Oxo-octanoyl-CoA has CHEBI:28264 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 (S)-3-Hydroxydecanoyl-CoA has CHEBI:28325 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 trans,cis-Lauro-2,6-dienoyl-CoA has CHEBI:28387 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Decanoyl-CoA has CHEBI:28493 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 (S)-3-Hydroxyoctanoyl-CoA has CHEBI:28632 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Trans-Hex-2-enoyl-CoA has CHEBI:28706 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 2-trans-4-cis-decadienoyl-CoA has CHEBI:29119 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 3-trans-decenoyl-CoA has CHEBI:29126 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP143_rr137128 Fatty Acid has CHEBI:35366 from ChEBI but expected a LIPID MAPS identifier

More details at https://www.wikipathways.org/WikiPathwaysCurator/LIPIDMAPSTests/onlyLIPIDMAPS