Activation of anterior HOX genes in hindbrain development during early embryogenesis (Homo sapiens)

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3, 5, 11, 14, 16...38, 39, 49606, 26, 41, 45, 6139, 4134, 39, 41, 43, 527, 8, 20, 3526, 36, 39, 45, 63275852, 57, 67497, 8, 20, 26, 33...1, 12, 15, 18, 39...38, 494, 17, 622318, 21, 26, 33, 39...39, 4122, 52, 576329, 32, 52, 5739, 4152, 5726, 36, 39, 41, 4539, 414910, 29, 32, 65671, 9, 12, 152, 3249cytosolnucleoplasmHIST1H2AB HIST1H2BM POLR2D HIST1H2AJ HIST1H2BB HIST1H2BJ CNOT6 HIST1H2BB HIST1H2BL H2AFZ HIST1H2BD HIST3H2BB atRA NCOA6 RARA Me3K5-HIST1H3A HIST1H2BK atRA:RARA,B:RXRA atactive HOXB4chromatinNCOA3HIST1H4 POLR2E HOXB2 gene H2AFV HIST1H2BA HOXD3 mRNAHIST1H2BA EP300 RARB PAGR1 HIST1H4 HIST1H2AB PAXIP1 Me3K5-H3F3A HIST1H2BL H2AFX RARA,G:RXRA at HOXB1bivalent chromatinEED SUZ12 AJUBAHIST1H2AJ ASH2L Me3K5-HIST1H3A POLR2D Me3K5-H3F3A HIST1H2BJ Me3K5-HIST2H3A ASH2L HIST1H2BM HOXD4 mRNAH2AFX HIST1H2BN HOXD3 gene H2AFV atRAHIST1H2BO HOXD3 activechromatinNCOA6 Me3K-28-HIST1H3A HIST1H2BA HIST1H2BK EGR2 H2BFS Me3K5-H3F3A NCOR1HIST1H2BH SUZ12 HIST1H4 HIST1H2BM HIST1H2BO HIST1H2BD Me3K5-HIST1H3A MAFB,HOXB1:PBX1:PKNOX1at active HOXA3chromatinHIST1H2BN HIST1H2BA POLR2K HIST1H2BC HIST1H2BD HIST1H2AB POLR2J HIST1H2AC PAXIP1 H2AFZ Me3K5-H3F3A POLR2I POLR2F HOXA1POLR2J RBBP5 PKNOX1 RBBP7 H2AFX WDR5 HIST1H2BM HOXB2 gene H2AFB1 HIST1H2BL HIST1H2AD H2AFV POLR2G HIST3H2BB HIST1H2BM POLR2E HIST1H2BJ Me3K-28-H3F3A ASH2L Me3K5-HIST2H3A HIST1H2AB HOXB3 gene POLR2B POLR2A PCGF2 HIST1H2BD RXRA KMT2D RXRA KMT2C POLR2C HIST2H2AA3 HIST1H2BO HIST2H2AA3 Me3K5-HIST1H3A PAGR1 POLR2L Me3K5-H3F3A HIST1H2BN NCOA6 HIST1H2BJ HIST2H2BE Me3K-28-H3F3A H2BFS HIST1H2BL H2AFJ KMT2C H2AFJ EZH2 Me3K5-HIST2H3A H2AFZ NCOA6 HIST1H2BN HIST2H2BE H2AFB1 POLR2B H2AFJ HIST1H2AJ HOXA2EP300 MEIS1POLR2J HIST1H2BO Me3K5-HIST2H3A Me3K5-HIST1H3A POLR2A HIST1H2BH HIST1H2BO POLR2A HIST3H2BB HIST1H2BB H2AFV POLR2H POLR2D HIST1H2AC HIST1H2AD Me3K5-H3F3A POLR2B POLR2C Me3K5-HIST2H3A POLR2L POLR2A HIST1H2BB HIST2H2AA3 HOXA3 gene HIST2H2AC POLR2E HIST1H2BC RBBP5 H2BFS POLR2C H2AFV HIST1H2BH HIST1H2BA Me3K-28-H3F3A Me3K5-H3F3A HOXB3 gene H2AFV EP300 EZH2 RBBP4 HIST2H2BE Me3K5-HIST2H3A HIST1H2BJ HIST1H2BN POLR2L H2AFX HIST1H2AC HIST1H2BL HIST1H2BC HIST2H2AA3 KDM6A H2AFJ POLR2J HIST2H2BE PAGR1 HIST1H2BO HIST1H2BL HIST1H4 POLR2C HIST1H2BC HIST1H2BH POLR2H H2AFV Me3K5-H3F3A HIST1H2AD HIST3H2BB RARB H2BFS HIST1H2BD Me3K5-H3F3A HIST3H2BB H2AFB1 HIST1H2BD HIST1H2BL POLR2F HIST2H2BE HIST2H2AA3 H2AFX HIST1H2BC H2AFV POLR2G HIST1H2BO KDM6A POLR2L HIST1H2AC H2AFV Me3K5-HIST2H3A H2AFJ HIST1H2BD WDR5 POLR2H HIST1H2BM CREBBPCNOT6:ZNF335POLR2J H2AFV H2BFS HIST1H2BM HIST1H2BK CTCF HIST1H2BN HIST1H2BA H2AFB1 HIST1H2BJ HOXA2 gene Me3K5-H3F3A H2BFS HIST1H2BK POLR2A RBBP7 HIST1H4 POLR2E EZH2 HIST1H2BL H2AFV ASH2L HIST1H2AB RBBP5 H2BFS POLR2I EZH2 RBBP7 NCOA3 POLR2H HIST1H2BN POLR2H CTCF H2AFV H2AFV H2AFJ Me3K-28-HIST1H3A H2AFB1 HIST1H2AJ RARA HIST1H2BD MAFB HIST2H2BE Me3K5-HIST2H3A HIST1H2AC HIST1H2BN HOXB3 geneHIST1H2BL KMT2C Me3K5-HIST1H3A HIST1H2BJ HIST2H2BE RBBP7 HIST3H2BB HIST1H2AB PAXIP1 H2AFZ HIST1H2BA POLR2K RARG HIST1H2AD HIST1H2BJ H2AFZ EGR2POLR2I HIST1H2BL NCOA6 HIST1H2BK HIST1H2BJ HIST1H2BB NCOA6 HIST3H2BB HIST1H2BL HIST1H2BM HIST1H2BJ Me3K5-HIST2H3A PAXIP1 HIST1H2BN Me3K5-H3F3A H2AFJ HIST1H2AB POLR2I HIST1H4 HIST1H2BK POLR2I HIST1H2AC HIST1H2BN HIST1H2BK PBX1:PKNOX1KMT2D POLR2L HIST1H2BC Me3K5-H3F3A HIST2H2AA3 H2AFJ HIST1H2BM POLR2K HIST1H2BB HIST1H2BC HOXA3HIST1H2BL HIST2H2AA3 HIST1H2AJ PAGR1 HIST2H2BE H2BFS Me3K5-HIST1H3A RBBP7 KMT2D HIST1H2AJ PBX1 HIST1H2BM HOXD3 gene Me3K-28-HIST2H3A HOXB1 HIST2H2BE HIST1H2BM HIST1H2BB HOXD1 gene HIST1H2AB HIST1H4 POLR2F H2AFB1 H2AFZ Me3K5-HIST2H3A PAXIP1 HIST1H2AB HOXA2 activechromatinMe3K5-HIST1H3A HIST1H2BD SUZ12 HIST2H2BE Me3K5-H3F3A POLR2J POLR2F HIST1H2AB HOXA3 gene HIST3H2BB H2AFJ HIST2H2BE POLR2L atRA HOXA2 gene RNA Polymerase IIholoenzyme complex(generic)HIST1H2BJ WDR5 NCOA6 H2AFX Me3K5-HIST2H3A HIST1H2BD HIST1H2BO HIST2H2BE HIST1H2AD POLR2D Me3K5-H3F3A HIST3H2BB PAGR1 HIST1H2AB Me3K5-H3F3A NCOA6 EZH2 POLR2H HOXD1 activechromatinHIST2H2AC H2AFX Me3K5-HIST2H3A HIST1H2AJ H2BFS HIST2H2BE Me3K5-HIST2H3A KDM6A WDR5 HOXD1 mRNAHIST1H2AD HIST1H2AJ HOXB4 gene HIST1H2AD ASH2L KDM6A H2AFX POLR2A POLR2G KMT2C H2BFS HOXD3 geneHIST1H2BO RARB PBX1 HIST1H2BO POLR2E H2AFV PKNOX1 HIST1H2AB HIST1H2BM HIST1H2BK H2BFS H2AFZ POLR2C atRA HIST1H2AJ HIST2H2BE KMT2C POLR2K Me3K5-HIST1H3A HIST1H2BH POLR2J POLR2D Me3K-28-HIST1H3A RBBP7 RBBP5 EGR2 at active HOXA2chromatinHIST1H2AD POLR2K HIST1H2BC HIST1H2BD HIST1H2BC HIST2H2AA3 HIST1H2BH POLR2J HIST1H2AB HIST1H2BC KMT2D POLR2F KDM6A HIST1H2BK HIST1H2BD HIST1H2AD HIST1H2AC H2AFZ HOXA3 mRNAEZH2 Me3K5-HIST1H3A H2AFX HIST1H2AC PAXIP1 HIST1H2BD H2AFZ HIST1H2BD H2AFZ KMT2C KMT2C SUZ12 NCOA6 HIST2H2BE HIST1H4 PCGF2HIST1H2AD HIST1H2BC POLR2C RARG H2BFS POLR2G POLR2J HIST1H2BJ WDR5 Me3K-28-H3F3A RBBP4 HIST1H2BN POLR2B PAXIP1 HIST1H2BO HOXB1:PBX1:MEIS1,PKNOX1 at active HOXB2 chromatinPOLR2A HIST1H2BA H2AFZ HIST1H2BB POLR2B HIST1H2AB HIST2H2AC WDR5 HIST1H2AD HIST2H2AC EED POLR2A HIST1H2BL HIST1H2BA RARB HIST1H2BC HIST1H2BK POLR2E HIST1H4 PBX1 HOXB2 mRNANCOR1 Me3K-28-HIST2H3A POLR2K PAGR1 PBX1:PKNOX1HIST1H2BO RXRA RARA RBBP5 HIST1H2AJ HIST1H2BN EP300 POLR2B HIST1H2BA SUZ12 HIST2H2AC POLR2G HIST1H2AJ KMT2D Me3K5-HIST2H3A H2AFV HIST1H2BB HIST1H2BJ RBBP5 HIST1H2AC HIST1H2AJ H2BFS POLR2A HIST1H2BO HIST1H2BM H2AFV HIST1H2BO POLR2H HIST1H2AD HIST1H2BM POLR2F HOXA4 geneEGR2 at active HOXB2chromatinH2AFB1 H2AFZ HIST3H2BB HIST1H2BN HIST1H2BL H2AFB1 PAXIP1 POLR2G HIST1H2BO POLR2L RBBP5 H2AFZ H2AFZ HIST2H2AC HIST1H2BH HIST1H2AB JUN POLR2L HIST1H2BD POLR2G HIST1H2BJ HIST1H2BK HIST1H2BC POLR2H SUZ12 KDM6A RBBP5 POLR2F HOXB4 geneHOXC4atRA:RARA,B:RXRA atactive HOXD4chromatinHIST1H2AJ H2AFB1 POLR2C HIST1H2BB PAXIP1 HIST1H2BO RARA,B:RXRA at HOXA4bivalent chromatinHIST1H2BA ZNF335 HIST2H2AA3 HIST3H2BB H2BFS KMT2D RBBP4 POLR2D H2AFV HOXA1 geneMe3K5-HIST2H3A H2BFS HIST1H2BO HIST1H2BJ Me3K-28-HIST1H3A HOXB1 gene H2AFX HIST1H2BO HIST1H2BN Me3K-28-HIST1H3A Me3K-28-HIST2H3A CREBBP H2AFJ ASH2L EP300HIST1H2BO HIST2H2BE RBBP4 HOXC4 activechromatinEGR2HIST1H2BA H2AFX Me3K5-HIST1H3A HIST1H2AB WDR5 HIST1H2BA HIST2H2AC HIST2H2AA3 H2AFB1 HIST2H2AC WDR5 HIST1H2AJ MEIS1 HIST2H2AA3 H2BFS RBBP5 H2AFX Me3K-28-HIST2H3A H2AFV H2AFX POLR2D RARB HIST1H2BJ MLL2,3 complexH2AFX HOXA2 gene POLR2C NCOA3 Me3K5-HIST1H3A atRA POLR2F MAFB HIST1H2BB HIST1H2BB POLR2E POLR2F HOXD1HIST1H2BN HIST1H2BM HIST1H2BD SUZ12 HIST1H2BD H2AFV HOXA2 bivalentchromatinHOXA1 mRNAHIST3H2BB HIST1H2BJ POLR2E HIST1H2AC PBX1 HOXD4 gene H2AFX HIST1H2BK ASH2L POLR2C atRA:RARA,G:RXRA atactive HOXB1chromatinH2AFZ EED HOXA4 gene RARA HIST3H2BB H2AFB1 HIST1H2AD HIST1H2BA POLR2D Me3K5-HIST1H3A HIST1H2BH POLR2A HIST2H2BE Me3K5-H3F3A POLR2B KDM6A KMT2C HIST1H2BH HIST1H2BM Me3K-28-HIST2H3A POLR2I HIST1H2BK NCOA3 RARA HIST1H2AC HIST1H4 HIST2H2AC HOXB1:PBX1:PKNOX1and MEIS1 at activeHOXB1 chromatinH2AFX HIST1H2AD KMT2D POLR2K POLR2L Me3K-28-HIST1H3A POLR2G HIST1H2BH ASH2L Me3K-28-HIST1H3A H2AFJ HIST1H2AB POLR2F H2BFS POLR2F POLR2H HIST1H2BC HIST1H2BJ HIST1H2AC CTCF Me3K5-H3F3A Me3K5-HIST2H3A HIST1H2BH Me3K5-HIST2H3A EZH2 RBBP4 HIST3H2BB Me3K5-H3F3A H2AFB1 EP300 HIST2H2AC PAXIP1 HIST1H2BC HIST1H2AC HIST2H2BE KMT2D RBBP5 HIST1H2BK H2AFZ HIST1H2AD KMT2C RARA HIST1H2BH RARA,B:RXRA at HOXD4bivalent chromatinPOLR2I HIST2H2AC H2AFZ SUZ12 HOXB2HIST1H2BM HIST1H2BL H2AFJ HIST1H2AJ HIST1H2BK HOXB1 gene RBBP7 HIST1H2BM HIST1H2BH HIST1H2AJ RBBP4 POLR2K H2AFZ HIST1H2BC HIST1H2AC HIST1H2BO PBX1 Me3K5-HIST1H3A RBBP5 HIST3H2BB ASH2L HIST1H2AC Me3K5-HIST1H3A POLR2J HIST2H2AC H2AFB1 HIST1H2AD POLR2L HIST1H2AC HIST1H2BJ POLR2B HIST1H2BK HIST1H4 HOXD1 geneH2AFZ HIST1H4 HIST1H2BN HOXB1 geneMe3K5-HIST2H3A POLR2L HIST1H2BL EGR2HIST2H2AC HOXD4EED RARG HIST1H2AD H2AFX RXRA Me3K5-H3F3A HIST1H2BH Me3K5-HIST1H3A POLR2D HOXB1 H2AFX HIST1H2AB WDR5 HIST1H2BB HIST1H2BK Me3K5-HIST2H3A H2AFJ HIST1H2BM HIST1H2AB H2AFB1 PAGR1 HIST2H2BE HIST1H2BJ YY1 HIST1H2AC POLR2K HDAC3 KMT2D HIST1H2BN NCOA6 Me3K5-HIST1H3A HIST1H2AB HIST1H2BH HIST1H2BN HIST1H2BA HIST1H2BB HIST2H2AC CTCF Me3K5-HIST2H3A WDR5 POLR2K EED HOXD3HIST1H2AD HIST3H2BB HIST1H4 H2AFX HIST1H2BH Me3K5-HIST1H3A H2AFX HOXC4 gene HIST2H2BE MEIS1 POLR2G Me3K-28-HIST1H3A H2AFB1 HIST1H2BJ HIST2H2AC POLR2D HIST1H2BA ASH2L KDM6A HOXA1 gene H2AFZ NCOA3 Me3K-28-H3F3A HIST1H2BC HIST1H2AJ RBBP4 HOXC4 bivalentchromatinH2AFV Me3K5-HIST2H3A H2AFJ PAGR1 HIST1H2BA RBBP4 PKNOX1 H2AFZ RXRA HIST1H2BN HOXB3 bivalentchromatinHIST2H2BE POLR2K HIST1H2BO HIST1H2AB Me3K5-HIST1H3A EZH2 KDM6A KMT2D HIST1H2BO HIST1H4 HIST1H2BM POLR2K HIST1H2BO POLR2D HIST1H2AJ H2BFS HIST1H2BJ EED Me3K5-H3F3A HIST1H2BM HIST1H2BB KMT2D HOXA3 activechromatinHIST2H2AC PBX1:PKNOX1POLR2J POLR2A Me3K-28-HIST1H3A HIST1H2AD Me3K5-H3F3A HIST1H2BM HIST2H2AA3 HIST2H2AC POLR2B KDM6A HOXD4 gene PAXIP1 HIST1H2AJ HOXC4 geneMe3K-28-HIST2H3A H2AFB1 HIST1H2BC HOXA3 geneHIST1H2BH HIST2H2AA3 HIST1H2BD NCOA6 HOXA4RBBP4 RBBP5 RBBP5 HIST1H2BH Me3K5-HIST1H3A HIST1H2BL Me3K5-HIST1H3A HIST1H2BC HIST1H2BC HIST2H2AC H2AFZ HIST3H2BB RBBP7 HIST1H2BO HIST1H2BH HIST1H2BL NCOA6 HIST1H2BK HIST2H2AC HIST1H4 RBBP5 POLR2L EED HOXB1 mRNAH2AFB1 HIST1H4 HIST1H2BB WDR5 HIST1H2AC HIST1H2AJ NCOR1 H2AFB1 HIST1H2BD HIST1H2BN H2AFX HIST1H2BC POLR2I Me3K5-HIST1H3A H2AFV Me3K5-H3F3A MAFBHIST1H2BN EZH2 HIST1H2BD HIST2H2AA3 HIST2H2AA3 HIST1H4 Me3K-28-H3F3A HIST1H2AC H2BFS HIST1H2AC HOXB4 mRNAHOXB3 gene H2AFX PKNOX1 HIST1H2BL HIST1H2BB H2AFJ HIST1H2BH POLR2E RARA,B:RXRA at HOXB4bivalent chromatinPOLR2C HIST1H2BH POLR2I HIST1H2BA HIST1H2AC PAGR1 HIST1H2BA HIST3H2BB RARA H2AFJ H2AFB1 ASH2L RBBP5 H2AFX POLR2G HIST1H2BK HIST1H2AC HIST1H2BL HIST1H2BB HIST1H2AC HIST2H2AC H2AFZ HIST1H2AJ HIST1H2BH PAGR1 H2AFZ POLR2F POLR2E EED H2AFJ RXRA HIST1H4 HIST2H2BE Me3K-28-H3F3A H2BFS EZH2 NCOA6 HIST3H2BB HIST1H4 RBBP7 HOXA3 bivalentchromatinRXRA HOXA4 mRNAMe3K5-H3F3A HOXA2 mRNAHIST1H2BD HIST1H2BH HIST1H2BN H2AFB1 POLR2H POLR2I SUZ12 HOXB2 gene KDM6A HIST1H2BB H2AFB1 HIST1H4 HIST2H2AA3 Me3K-28-HIST1H3A HIST1H2BB POLR2A HIST1H2BA Me3K5-HIST2H3A HIST1H2BK HIST1H2AC SUZ12 POLR2D HIST3H2BB HIST1H2BJ HIST1H2BB POLR2C H2AFB1 H2AFJ HIST1H4 HIST1H2BN PAXIP1 HIST3H2BB NCOA3 HIST1H2BD H2AFV Me3K5-HIST1H3A POLR2H POLR2L H2AFB1 POLR2E POLR2A POLR2B Me3K5-H3F3A PBX1 RBBP7 HIST2H2AC POLR2A HIST1H2BC POLR2K PKNOX1 HIST2H2AA3 HIST1H2BM HIST1H2AB WDR5 HIST1H2AJ HIST1H2BK HIST1H4 SUZ12 HIST1H2BA POLR2C HIST1H2BJ AJUBA KMT2C HIST1H2AD PKNOX1 POLR2J KDM6A PBX1:PKNOX1,MEIS1HIST1H2BH KDM6A HIST1H2AD KMT2C HIST3H2BB HIST1H2BJ HIST1H2BH PBX1 HIST2H2AA3 RBBP4 EGR2HIST1H2AD POLR2K KMT2D EED HIST1H2AB H2AFJ PAGR1 Me3K5-H3F3A NCOR1 KDM6A PAGR1 HIST2H2AC H2AFJ H2AFX POLR2B ASH2L HIST1H2BN HIST1H2AD HIST1H2BA HIST1H2BL PAGR1 HOXD1 bivalentchromatinMe3K5-HIST2H3A POLR2E HIST1H2BO H2BFS HIST2H2BE HIST1H2BO HIST1H2BC HIST1H2AJ HIST1H2BH HIST1H2BJ HIST1H2BM Me3K-28-H3F3A HIST1H2AB HIST1H2BL H2AFJ Me3K5-HIST1H3A HIST1H2AD KMT2D HIST1H2AC HIST1H4 EGR2 HIST1H2BH POLR2F HIST2H2AC Me3K-28-HIST1H3A HIST1H2AJ HOXA2 geneH2AFJ EED RQCD1HIST1H2BB KMT2D HIST1H2BC HIST1H2BH RXRA