Activation of anterior HOX genes in hindbrain development during early embryogenesis (Homo sapiens)

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3-5, 9, 16...6, 8, 40, 42, 617, 40, 48, 57, 617, 12-14, 23...40, 613840, 611, 6534, 52, 621, 40, 657, 21, 56, 57, 6140, 61196, 10137, 43, 45, 6712, 14, 28, 537, 40, 48, 51, 57442516, 10, 365117, 13, 15, 18, 40...40, 616, 10, 37, 4326, 436, 10, 501, 15, 40, 47, 49...5039, 47, 49, 54cytosolnucleoplasmH2BFS HIST1H2AC SUZ12 Me3K-28-HIST1H3A POLR2F HIST1H2BN POLR2H WDR5 RBBP5 HOXA4HIST1H2BL HOXA4 mRNAPAX6HIST3H2BB H2AFX HIST2H2BE Me3K5-HIST1H3A Me3K5-H3F3A RNA Polymerase IIholoenzyme complex(generic)HIST1H2AB Me3K-28-HIST1H3A HIST1H2AD POLR2E POLR2G Me3K5-H3F3A POLR2E HIST3H2BB HIST1H2AC HIST1H2AB RARB Me3K-28-H3F3A HIST1H2BL HIST1H2BH HIST1H2BB KMT2D PAXIP1 WDR5 HIST1H2BH Me3K-28-HIST2H3A KMT2D HIST1H2BA POLR2F HIST2H2AA3 HIST1H2AC H2AFB1 HIST1H2AC HIST1H2BA KMT2D H2BFS POLR2L HIST1H2AB HIST1H2BD HIST3H2BB Me3K-28-HIST1H3A ASH2L Me3K-28-H3F3A RARA,B:RXRA at HOXB4bivalent chromatinHIST3H2BB RXRA Me3K5-HIST1H3A KMT2D RXRA H2AFB1 POLR2I H2AFX KMT2D H2AFZ POLR2D HIST2H2AC EED HIST1H2BL HIST1H2AC HIST1H2BK MAFB:JUN and EGR2 atactive HOXB3chromatinH2AFX H2BFS POLR2D HIST1H2BJ PAXIP1 HIST2H2AA3 POLR2K POLR2E EZH2 EZH2 POLR2H KDM6A POLR2F HIST3H2BB HIST1H2BB HIST2H2BE HOXA3 gene HIST1H2BO HOXD4 gene NCOA6 atRA:RARA,G:RXRA atactive HOXA1chromatinHIST1H2BH POLR2D POLR2H RBBP7 H2BFS Me3K-28-HIST2H3A HIST1H2BO HIST2H2BE HOXA3HIST1H2BB HIST1H2BA MAFBHIST2H2AC Me3K5-HIST1H3A HIST1H2BA CNOT6:ZNF335HIST1H2BM HIST1H2AB ASH2L HIST1H2BC HIST1H2BN POLR2F HOXA3 activechromatinH2AFB1 HIST1H2AC POLR2L H2AFZ RBBP4 HIST1H2BC HIST1H2BK H2BFS POLR2J KDM6A PAGR1 HIST1H2BO HIST1H2BN RARB HIST1H2AC HIST1H2AJ H2AFX HIST1H2AC POLR2C HIST1H2BO HIST1H2BJ POLR2K HIST1H2AC HIST1H2BC Me3K5-HIST1H3A HIST2H2AA3 H2AFB1 HIST1H2BH POLR2J H2BFS POLR2K H2AFB1 NCOA3HOXB4 mRNAHIST2H2BE HIST1H2BD PAX6 POLR2L POLR2I HIST1H2BN POLR2J HIST1H2AD RBBP5 RBBP7 HIST1H2BJ HIST1H2BL EZH2 HIST1H2AC POLR2J POLR2C Me3K5-HIST1H3A HIST1H2BJ HIST1H2BO HIST1H2BJ HIST2H2AA3 KMT2C HIST1H2BN EED SUZ12 HIST2H2AA3 Me3K5-HIST1H3A HIST1H2BB HIST1H2BJ KMT2C atRA:RARA,B:RXRA atactive HOXA4chromatinKMT2C PRC2 (EZH2) CoreMe3K-28-HIST1H3A HIST1H2BD HIST1H2AD HOXC4HIST3H2BB HIST1H2BK HIST2H2AA3 Me3K-28-HIST2H3A H2AFX KMT2D RQCD1H2AFX HIST1H2AB ASH2L POLR2F HIST1H2AD RBBP7 NCOA6 HIST2H2AA3 HIST1H2BB HIST1H2BD HIST1H2BH NCOA6 POLR2A KMT2C HIST1H2BA HIST1H2BJ H2AFZ HIST1H2BM HIST1H4 H2AFX KDM6A H2BFS EGR2 at active HOXB2chromatinHIST2H2AC POLR2I RBBP5 HOXD4 gene ASH2L H2AFB1 HIST1H2AJ HIST2H2BE Me3K-28-HIST2H3A HIST1H2BL EZH2 H2AFB1 HIST3H2BB KMT2C HIST1H4 HIST1H2BJ HIST1H2BH RARA RBBP7 H2AFX HIST1H2AB POLR2J H2AFB1 KMT2D HIST1H2BO RBBP5 HIST1H2BK HOXB1 geneH2AFZ HIST2H2AA3 POLR2L H2AFZ HIST2H2AC POLR2B HIST1H2AD NCOR1atRA Me3K-28-HIST2H3A H2AFZ WDR5 HIST1H2BL HIST2H2BE POLR2K HIST1H2AJ HIST1H2BA HIST1H2BC H2AFX HIST2H2AC HIST1H2BB MEIS1 KDM6A SUZ12 H2AFX EGR2HIST1H4 HIST1H2BC HIST1H2BL HIST1H4 POLR2I H2AFX RBBP5 HOXC4 mRNAPOLR2J HIST1H2AJ HIST1H2BK H2AFB1 H2AFZ HIST1H2BD Me3K5-H3F3A POLR2A HIST2H2AA3 KMT2C NCOA3 HIST1H2BH HIST2H2AC HIST3H2BB HIST2H2AA3 NCOA6 HIST1H2BN ASH2L HIST1H2BA CREBBP HIST1H2BC KDM6A POLR2E POLR2F POLR2J HOXB3 activechromatinPOLR2D HIST1H2BA H2AFB1 HIST1H2BB HIST1H2BH HIST1H2BK KMT2C Me3K-28-HIST1H3A HIST1H2AC HIST1H2AJ HIST2H2AC Me3K-28-HIST1H3A HIST1H2AJ Me3K5-H3F3A POLR2K HIST1H2BA POLR2J HOXB3 gene H2AFZ RARB POLR2D MAFB HIST3H2BB RBBP7 HIST1H2BO RBBP7 HIST1H2BL HIST1H2BJ HIST1H2BD Me3K5-H3F3A KDM6A PAGR1 HOXB3HIST1H2BC POLR2E POLR2C HOXB3 mRNAHOXA3 gene HIST1H2AC Me3K5-HIST1H3A RBBP7 KDM6A HIST2H2BE HIST1H2BO POLR2E HIST1H2BM PAXIP1 Me3K5-HIST2H3A PKNOX1 HIST1H2BO HIST2H2AC POLR2G HIST1H2AJ HIST1H2BA H2AFB1 ASH2L HIST1H2BJ H2AFZ H2BFS HIST2H2AC POLR2H HIST3H2BB HIST1H2BN HIST2H2AA3 POLR2H HOXA2 gene POLR2H HIST1H2BO HIST1H2AD Me3K5-H3F3A HIST1H2BK HOXB2 activechromatinHIST1H2AB Me3K5-HIST2H3A Me3K5-HIST1H3A HIST1H2BL HIST2H2BE SUZ12 HOXA1 gene H2BFS NCOA6 POLR2A RBBP4 Me3K-28-HIST2H3A POLR2K HIST1H4 HIST1H2BH POLR2F EGR2 atRA:RARA,B:RXRA atactive HOXB4chromatinHIST2H2AC HIST1H2BH POLR2C ASH2L H2AFZ HIST1H2BB POLR2I NCOA6 HIST1H2BA ASH2L H2AFB1 PBX1 Me3K5-HIST2H3A EP300 HIST1H2BH POLR2K HIST1H2AB H2AFZ H2AFX HIST2H2BE HIST1H2BB POLR2L HIST1H2BM HIST1H2BB HIST1H2BD HIST1H2BA PAGR1 WDR5 HIST1H2BA HIST1H2AJ Me3K-28-HIST2H3A EED HIST1H2BO HIST1H2BL Me3K-28-H3F3A H2AFX HIST2H2AC POLR2E HIST1H2AB PBX1 ASH2L Me3K-28-H3F3A EED Me3K-28-H3F3A RARG HIST1H2BL Me3K5-H3F3A HIST1H4 H2AFX EZH2 HIST3H2BB HIST1H2AC HOXA2 genePOLR2A HIST1H2BN POLR2C POLR2G HOXB2 gene Me3K5-HIST1H3A POLR2I HIST1H2BM HDAC3 HIST1H2BJ HIST1H2BJ HIST1H2AC H2AFX HIST1H2BJ HIST2H2AA3 atRA HIST1H2BD POLR2J HIST1H2BK RBBP7 PBX1:PKNOX1NCOA6 HIST2H2AC MEIS1 Me3K-28-HIST2H3A POLR2B H2BFS HIST1H2BM HIST1H2AJ POLR2H POLR2G HIST1H2AD PAGR1 HOXC4 gene AJUBA RARA HOXA1HIST1H2BK HIST1H2BJ Me3K5-HIST1H3A POLR2B HIST1H2AC HIST2H2AA3 Me3K5-HIST1H3A Me3K5-HIST1H3A HIST1H2BH HIST1H2BA POLR2A H2AFZ PAXIP1 POLR2D H2AFB1 Me3K5-H3F3A HIST2H2AC HIST1H2BH HIST1H2AJ HIST1H2BA Me3K5-H3F3A Me3K-28-HIST1H3A HOXB1 HIST1H2AJ POLR2B HIST1H2AC HIST3H2BB POLR2D WDR5 HIST1H2BB HOXB1HIST1H2BH HIST1H2BH HIST1H2BB POLR2E HIST1H2AC POLR2K H2AFB1 HIST3H2BB HOXA2 gene RBBP5 HIST1H2BL KMT2C ASH2L HIST1H2BH HIST1H4 HIST1H2AC POLR2H HIST2H2AA3 HIST2H2AC HOXB1 gene POLR2E Me3K5-HIST1H3A HIST2H2AC H2AFZ EP300 POLR2J HIST2H2BE H2AFZ HIST1H2AB POLR2A POLR2I H2AFZ HIST1H2BM SUZ12 HIST1H2AB HOXB4 genePOLR2F POLR2B HIST1H2BC MLL2,3 complexHIST3H2BB HIST1H2BM HIST2H2AA3 HIST1H2BD HIST1H4 HIST2H2AC PAGR1 KMT2C HIST1H2BH ASH2L Me3K-28-HIST1H3A HIST1H4 HIST1H2AD HIST2H2AC MAFB,HOXB1:PBX1:PKNOX1at active HOXA3chromatinMe3K5-HIST1H3A RBBP5 RBBP4 H2AFX POLR2G Me3K5-HIST1H3A KMT2C HIST1H2BK PAGR1 HOXC4 bivalentchromatinHIST1H2AC HDAC3H2AFX ZNF335 HIST1H2AC HIST1H2BH Me3K5-H3F3A Me3K5-H3F3A POLR2H RXRA HIST2H2AC Me3K5-HIST2H3A RARA POLR2D HIST1H2BL Me3K5-H3F3A HIST1H2BM HIST1H2BD POLR2D H2AFZ WDR5 HIST1H2BB POLR2A POLR2A KMT2D HIST1H2BJ PBX1 PKNOX1 HIST1H2BC RARA HIST1H2BJ HIST1H2AB HIST1H2BC POLR2J HIST1H4 POLR2C RBBP7 HIST1H2BC POLR2G HIST1H2AJ HIST2H2BE JUN HIST1H2BM HIST1H2BN POLR2B HIST1H2BN POLR2C ASH2L ASH2L HIST2H2AA3 Me3K5-HIST2H3A POLR2C RARA,B:RXRA at HOXD4bivalent chromatinHIST1H2BB NCOA6 NCOR1 HIST1H2BK HIST1H2BC HIST1H2AB PBX1:PKNOX1HIST1H2BL HIST1H2BK Me3K5-H3F3A Me3K5-HIST2H3A KMT2C HIST1H2BA HIST1H2BM HIST3H2BB POLR2L POLR2F POLR2A HIST1H2AD HIST2H2BE HIST1H2BJ HIST1H2BN HIST1H4 POLR2E H2AFZ HIST1H2BB HIST1H2BK SUZ12 Me3K-28-HIST2H3A HIST1H2BD HIST1H2BL RARA,G:RXRA at HOXA1bivalent chromatinHOXB4HIST1H2BN HOXA3 mRNAPOLR2I POLR2A HIST1H2AD HIST1H2BN HIST1H2AB Me3K5-HIST2H3A PAGR1 HIST1H2BN HIST2H2AC POLR2B H2AFB1 HIST2H2AA3 HIST1H2AJ PKNOX1 HOXB3 bivalentchromatinHIST1H2BA HIST1H2AD MAFB HOXA2 bivalentchromatinatRA HOXB1:PBX1:PKNOX1 atactive HOXA2chromatinPBX1 PAXIP1 H2AFX HIST1H2AC CTCF Me3K5-H3F3A HIST1H2BM H2AFB1 HIST1H2BA HIST2H2BE WDR5 Me3K5-HIST2H3A EED HIST1H2BO HIST1H2BJ KMT2D H2AFX NCOR1 HIST1H2AJ HIST1H2AD RARG PAXIP1 NCOA6 HIST1H2BM HIST1H2BO HIST1H2BO HIST1H2BD NCOR1 RARB RARG H2AFB1 HIST1H2AJ HIST1H2BD HIST1H2BB HIST2H2AA3 HOXC4 geneHIST1H2BH HIST2H2AC H2AFX HIST1H2BB Me3K5-HIST2H3A Me3K5-HIST2H3A HIST1H2BH H2AFZ Me3K-28-HIST2H3A HIST1H2BO H2AFZ HIST1H2BN Me3K-28-H3F3A H2AFX H2AFB1 HIST2H2BE POLR2B H2AFB1 Me3K5-H3F3A Me3K5-HIST2H3A HIST1H2BC atRA Me3K5-HIST1H3A HIST1H2BC HIST1H2BK EGR2RARA HIST1H2BC HIST1H2BA H2AFZ RBBP4 HIST1H2AB HIST1H2BO NCOA3 POLR2I HIST1H2BH KMT2C PCGF2 Me3K5-HIST2H3A HIST1H2BD WDR5 HOXD3 bivalentchromatinHIST1H2BB H2AFX HIST1H2AD NCOA6 HIST1H2BN HIST1H2AC HIST1H2BD RBBP5 H2AFB1 HIST1H2AD Me3K-28-HIST1H3A HIST1H2AJ HIST1H2AB HIST2H2BE PBX1 EGR2 HOXD1 geneRXRA KMT2C HIST1H2BD RBBP4 POLR2I POLR2E POLR2C H2AFZ RBBP4 PIAS2POLR2B EED Me3K5-HIST1H3A HIST1H2BO Me3K5-HIST2H3A HIST1H2AB PAGR1 POLR2L HIST1H2BK HIST2H2AC HIST3H2BB HOXB3 gene Me3K-28-HIST1H3A HIST1H2BB HIST1H2BH HIST1H2AC HIST2H2AA3 H2AFB1 HIST1H2BM HOXA2 gene HIST2H2AA3 POLR2D SUZ12 HIST1H2BO RARB Me3K-28-HIST1H3A Me3K5-H3F3A POLR2G HIST2H2AC H2BFS Me3K5-HIST2H3A HIST1H2AD RBBP4 CREBBPKDM6A HIST1H2BO HIST1H2BD HIST2H2BE HIST1H2BM AJUBAHIST1H2AJ HIST1H4 H2AFX HIST1H2BB HIST1H2BJ HIST2H2AA3 Me3K5-H3F3A NCOA3 HIST1H2AD HIST1H2BD HIST1H4 WDR5 HIST1H4 HOXB1 mRNAMe3K5-H3F3A Me3K-28-HIST2H3A MEIS1 H2AFX H2BFS HIST1H2BM HIST2H2AA3 RXRA Me3K-28-H3F3A HIST1H2AB POLR2C Me3K5-HIST2H3A HIST1H2BL POLR2K HIST1H2BC HIST1H2AD PAGR1 HIST1H2BM NCOA6 H2AFX HIST1H2BO H2AFZ HIST1H2BA POLR2F HIST1H2BK WDR5 EGR2POLR2H POLR2C RBBP5 HIST2H2AC H2BFS CNOT6 HOXB3 geneHIST1H2BC HIST1H2AJ Me3K5-HIST1H3A HIST1H2BK HIST3H2BB PAXIP1 H2AFX HIST1H2BN HOXA1 geneHIST1H2AJ POLR2B HIST1H2BJ H2AFB1 KDM6A HIST1H4 HIST1H2AC H2BFS PAXIP1 POLR2A HIST1H4 RARA EZH2 HIST1H2BB Me3K5-HIST1H3A HOXB1 HIST1H4 HIST1H2BN POLR2A HIST2H2AA3 HIST3H2BB Me3K5-H3F3A KDM6A HIST1H2BA Me3K5-H3F3A HIST2H2AC HOXB1 gene Me3K5-HIST1H3A POLR2C PAXIP1 WDR5 HIST2H2AA3 HIST1H2BL HIST1H2BO CTCF HIST1H2BO HIST1H2AB JUNRARA POLR2G EP300 PKNOX1 HIST1H2BN HIST1H2BD WDR5 Me3K5-HIST2H3A Me3K5-HIST2H3A HIST1H2BL HIST1H2BN POLR2G HIST1H2BK H2BFS HIST1H2AJ HOXC4 gene HIST1H2AC HIST3H2BB HIST1H2AD HIST1H2AD Me3K5-H3F3A HIST1H2AD HIST1H4 Me3K5-HIST2H3A H2BFS RBBP5 POLR2L HIST1H2AB HIST1H2BB HIST3H2BB HIST1H2BL HIST1H2AJ POLR2F H2BFS HIST1H2BA POLR2G HIST1H2BC HOXD1 bivalentchromatinHIST1H2BD Me3K5-HIST1H3A HIST1H2BO HOXB1 HOXB4 gene HIST1H2BC HIST2H2BE RARA,G:RXRA at HOXB1bivalent chromatinHIST2H2AC HIST1H2BH Me3K5-HIST2H3A HIST1H2BL HIST1H2BN POLR2I Me3K5-HIST2H3A POLR2K HIST2H2BE HIST1H2BK POLR2E H2BFS CTCF H2BFS HIST1H2AB KDM6A Me3K5-H3F3A Me3K5-HIST1H3A HIST3H2BB HIST2H2AC Me3K-28-H3F3A HIST3H2BB POLR2G HIST1H2BC POLR2A HIST1H2BK POLR2I HIST1H4 EZH2 HIST1H2BK NCOA6 HIST2H2BE WDR5 Me3K-28-H3F3A HOXD4 mRNAMe3K5-H3F3A HIST1H2BN HIST2H2BE H2AFX HIST1H2AJ NCOA3 POLR2K POLR2L ASH2L HIST1H2AD HIST1H2BJ HIST1H2BJ Me3K5-HIST1H3A RXRA KMT2D HIST1H2BH H2BFS HIST1H2AC HIST1H2BL HIST1H2AC POLR2I HIST1H2BK YY1 HIST1H2BC H2AFX H2BFS HOXA2 gene HOXA1 mRNAHIST3H2BB POLR2L RBBP5 PKNOX1 PBX1:PKNOX1,MEIS1H2AFZ HOXD3 gene HIST1H2BC POLR2D HIST1H2BO Me3K5-H3F3A HIST1H4 PBX1 MEIS1HOXB4 gene HOXD3 geneHIST1H2BA HOXC4 activechromatinNCOR1 RBBP7 HIST2H2BE HIST1H2BM POLR2L RBBP7 POLR2F HIST1H2BM HIST1H2BD HIST1H2BL EP300 POLR2H HIST1H4 HOXB1 HIST2H2BE HIST1H2BJ SUZ12 HIST1H2AD HOXA3 geneHOXA3 gene H2AFB1 HIST2H2AC HIST1H2AB HIST1H2BJ HIST1H4 KDM6A Me3K5-HIST2H3A HIST1H2BC HIST1H2BJ HIST3H2BB POLR2L HIST2H2AA3 SUZ12 POLR2B EED PAXIP1 H2BFS H2AFZ EED ASH2L KMT2C Me3K-28-H3F3A NCOR1 HOXB2 genePOLR2A HIST1H2BK Me3K5-HIST1H3A HIST1H2AC HIST1H2AJ RXRA POLR2C Me3K5-HIST2H3A KMT2D HIST1H2BM POLR2D NCOA6 PAXIP1 H2AFZ RBBP5 KMT2C HIST1H2BO HIST1H2AC HIST2H2BE HIST1H2BB HIST1H2BA POLR2H