Photosynthetic Carbon Reduction (Arabidopsis thaliana)

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Chloroplast1Light reactionsCalvin Cycle(Dark reactions)LightPhotosystem ILightPhotosystem IIADPCAB1RuBPP-glycolateP700CAB3H+ATPPT2RbS1AcRbcS1BNADPHglycoxylateCO2O2Fructose 6PNADPTriose-PRbcS2B3-PGARubiscoPlastocyaninRCAATPFerredoxin-NADP reductaseGlucose-UDPSucroseATPRbcS3BRbcLLHB1B2CAB2FerredoxinPlastoquinoneADPLHB1B1ATP SynthaseATPGLP1Glycolate


Description

No description

Quality Tags

Ontology Terms

 

Bibliography

  1. Lubert Stryer; ''Biochemistry''; Book Chapter 26: Photosynthesis, 1995
  2. Hankamer B, Barber J, Boekema EJ; ''STRUCTURE AND MEMBRANE ORGANIZATION OF PHOTOSYSTEM II IN GREEN PLANTS.''; Annu Rev Plant Physiol Plant Mol Biol, 1997 PubMed

History

View all...
CompareRevisionActionTimeUserComment
88319view15:38, 1 August 2016FehrhartOntology Term : 'photosynthesis pathway' added !
79803view16:23, 16 April 2015Mkutmonfixed unconnected line
71233view09:56, 16 October 2013EgonwAdded the 'Gramene Arabidopsis' for AT*-TAIR-G identifiers.
71004view16:16, 22 September 2013EgonwAdded a few identifiers, and cleaned up the oxygen/CO2 reactions to be more separate.
68453view19:37, 5 July 2013MaintBotUpdated to 2013 gpml schema
48305view04:20, 18 May 2012KhanspersUpdating PubChem xref
48175view22:58, 9 May 2012MaintBotAutomatic update of PubChem xrefs
40485view19:12, 1 March 2011MaintBotRemoved redundant pathway information and comments
38024view17:45, 30 July 2010MartijnVanIerselRubisco complex
37661view12:15, 18 June 2010MartijnVanIerselupdated plasto*
37660view12:00, 18 June 2010MartijnVanIerseladded some proteins of PSII
37659view11:51, 18 June 2010MartijnVanIerselPeriodical save, work in progress
37658view11:39, 18 June 2010MartijnVanIersellight reactions further specified
37218view21:30, 21 May 2010KhanspersModified categories
36800view14:11, 4 May 2010MartijnVanIerselRubisco side-reaction and sucrose synthesis
34945view12:59, 5 February 2010MartijnVanIerseladded missing id
34944view12:58, 5 February 2010MartijnVanIerseladded some missing database ids
34943view12:53, 5 February 2010MartijnVanIerselModified categories
34942view12:52, 5 February 2010MartijnVanIerselNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
3-PGAMetaboliteHMDB00807 (HMDB)
ADPMetaboliteHMDB01341 (HMDB)
ATP SynthaseGeneProduct
ATPGLP1GeneProductAT5G36700 (TAIR)
ATPMetaboliteHMDB01532 (HMDB)
ATPPT2GeneProductAT3G01550 (TAIR)
CAB1GeneProductAT1G29930-TAIR-G (Gramene Arabidopsis)
CAB2GeneProductAT1G29920-TAIR-G (Gramene Arabidopsis)
CAB3GeneProductAT1G29910-TAIR-G (Gramene Arabidopsis)
CO2MetaboliteHMDB01967 (HMDB)
FerredoxinGeneProduct
Ferredoxin-NADP reductaseGeneProduct
Fructose 6PMetaboliteHMDB00124 (HMDB)
Glucose-UDPMetaboliteCHEBI:18066 (ChEBI)
GlycolateMetaboliteHMDB00115 (HMDB)
H+Metabolite1010 (Chemspider)
LHB1B1GeneProductAT2G34430-TAIR-G (Gramene Arabidopsis)
LHB1B2GeneProductAT2G34420-TAIR-G (Gramene Arabidopsis)
NADPHMetaboliteHMDB00221 (HMDB)
NADPMetaboliteHMDB00217 (HMDB)
O2MetaboliteHMDB01377 (HMDB)
P-glycolateMetaboliteHMDB00816 (HMDB)
P700GeneProduct
PlastocyaninGeneProduct
PlastoquinoneMetabolite5375177 (PubChem-compound)
RCAGeneProductAT2G39730-TAIR-G (Gramene Arabidopsis)
RbS1AcGeneProductAT1G67090-TAIR-G (Gramene Arabidopsis)
RbcLGeneProduct
RbcS1BGeneProductAT5G38430-TAIR-G (Gramene Arabidopsis)
RbcS2BGeneProductAT5G38420-TAIR-G (Gramene Arabidopsis)
RbcS3BGeneProductAT5G38410-TAIR-G (Gramene Arabidopsis)
RuBPMetabolite16710 (ChEBI)
RubiscoGeneProductAT2G07732-TAIR-G (Gramene Arabidopsis)
SucroseMetaboliteHMDB00258 (HMDB)
Triose-PMetabolite
glycoxylateMetabolite

Annotated Interactions

No annotated interactions

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