Fatty Acid Beta Oxidation (Bos taurus)

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Saturated fatty acidsGlutaratetrans,cis-Lauro-2,6-dienoyl-CoACronoyl-CoA(S)-Hydrocyhexanoyl3-Oxododexanoyl-CoAFatty AcidOctaoyl-CoA4-cis-dexeboyl-CoADxotetradecanoyl-CoAUnsaturated fatty acids(S)-3-Hydroxydodexanonyl-CoALipasesTrans-Hexadecanoyl-CoATrans-Tetradex-2-enoyl-CoA3-Oxocanoyl-CoAACADVLACADSL-Glycerol-3-Phosphatecis,cis-3,6-Dodecadienoyl-CoAAcetoacetyl-CoAGCDHACADMAcetyl-CoAAcetyl-CoAACADMHADHBHADHAAcetyl-CoAHADHBHADHALIPCAcetyl-CoAAcetyl-CoASLC25A20Glutaryl-CoAHADHHADHB3-trans-decenoyl-CoAPalmitoyl-CoAHADHAAcetyl-CoAECHS1Trans-Dec-2-enoyl-CoA(S)-3-Hydroxytetradecanoyl-CoA(S)-3-Hydroxyoctanoyl-CoA(S)-3-Hydroxyhexadecanoyl-CoAACSL4ACSL3HADHBDecanoyl-CoAHADHAHADHBCHKBGKCPT1AHADHBHADHGlyceraldehyde-3-PhosphateECI1HADHGlycerolACSS2PNPLA2ACADLHADHBHADHAECHS1HADHALPLLinoleoyl-CoAHADHBHADHA2-trans-4-cis-decadienoyl-CoAHADHAAcetyl-CoAHSLTriacylglycerolCPT1B3-Oxohexanoyl-CoAHADHBDihydroxyacetone PhosphateACADM(S)-3-Hydroxybutanoyl-CoAACSL62-trans-dodecenoyl-CoACPT2HADHHADHAHADHBLauroyl-CoATrans-Oct-2-enoyl-CoAHADHBACADLACSL1Butanoyl-CoAHexanoyl-CoAAcetyl-CoADLDECI1ECHS1MGC142781GPD2ACAT1ACADLHADHHADHADECR1HADHAECHS1HADHA3-Oxopalmitoyl-CoAHADHBTPI1LIPFHADHAAcyl-CoA3-Oxo-octanoyl-CoAGK2ECHS1Trans-Hex-2-enoyl-CoAMyristoyl-CoAAcetyl-CoAACADSACADLHADHBACSL5TCA cycle(S)-3-Hydroxydecanoyl-CoATCA cycleTCA cycleTCA cycleTCA cycleTCA cycleTCA cycleTCA cycle


Description

Complete fatty acid beta-oxidation pathway for saturated and unsaturated fatty acids, developed and curated internally by BiGCaT Bioinformatics. This pathway was previously split into three parts plus a meta file for statistics. If you still have these you can replace all four with this single pathway.

Comments

HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP143(79783) with a 98.0% conversion rate.

Quality Tags

Ontology Terms

 

Bibliography

No bibliography


History

View all...
CompareRevisionActionTimeUserComment
97913view16:24, 23 June 2018EgonwReplaced a salt with a parent ID (from PubChem)
93219view14:01, 4 August 2017DeSlChanged 3-Oxododexanoyl-CoA ID to more stereospecific one.
80823view15:27, 30 June 2015Mkutmonhomology conversion
79782view12:56, 16 April 2015Mkutmonfix unconnected lines
79156view05:07, 6 March 2015MaintBotUpdated conversion from Hs
71407view19:01, 17 October 2013MaintBotAutomated update of data sources
63347view22:21, 9 May 2013MaintBotUpdated to 2013 gpml schema
40521view19:29, 1 March 2011MaintBotRemoved redundant pathway information and comments
33764view00:04, 9 December 2009MaintBotAutomatic update of empty xrefs
31694view11:48, 14 August 2009MaintBotFixed group labels
30630view22:26, 29 July 2009MaintBotNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
(S)-3-Hydroxybutanoyl-CoAMetaboliteCHEBI:15453 (ChEBI)
(S)-3-Hydroxydecanoyl-CoAMetaboliteCHEBI:28325 (ChEBI)
(S)-3-Hydroxyhexadecanoyl-CoAMetaboliteCHEBI:27402 (ChEBI)
(S)-3-Hydroxyoctanoyl-CoAMetaboliteCHEBI:28632 (ChEBI)
(S)-3-Hydroxytetradecanoyl-CoAMetaboliteCHEBI:27466 (ChEBI)
2-trans-4-cis-decadienoyl-CoAMetaboliteCHEBI:29119 (ChEBI)
2-trans-dodecenoyl-CoAMetaboliteCHEBI:15471 (ChEBI)
3-Oxo-octanoyl-CoAMetaboliteCHEBI:28264 (ChEBI)
3-Oxododexanoyl-CoAMetabolite11966169 (PubChem-compound)
3-Oxohexanoyl-CoAMetaboliteCHEBI:27648 (ChEBI)
3-Oxopalmitoyl-CoAMetaboliteCHEBI:15491 (ChEBI)
3-trans-decenoyl-CoAMetaboliteCHEBI:29126 (ChEBI)
ACADLGeneProductENSBTAG00000010579 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:33
ACADMGeneProductENSBTAG00000024240 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:34
ACADSGeneProductENSBTAG00000007484 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:35
ACADVLGeneProductENSBTAG00000003072 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:37
ACAT1GeneProductENSBTAG00000012885 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:38
ACSL1GeneProductENSBTAG00000004344 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2180
ACSL3GeneProductENSBTAG00000017258 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2181
ACSL4GeneProductENSBTAG00000018986 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2182
ACSL5GeneProductENSBTAG00000006707 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:51703
ACSL6GeneProductENSBTAG00000019708 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:23305
ACSS2GeneProductENSBTAG00000013303 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:55902
Acetoacetyl-CoAMetabolite1420-36-6 (CAS)
Acetyl-CoAMetabolite72-89-9 (CAS)
Acyl-CoAMetabolite9029-97-4 (CAS)
Butanoyl-CoAMetaboliteCHEBI:15517 (ChEBI)
CHKBGeneProductENSBTAG00000016050 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1120
CPT1AGeneProductENSBTAG00000021999 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1374
CPT1BGeneProductENSBTAG00000016048 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1375
CPT2GeneProductENSBTAG00000014649 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1376
DECR1GeneProductENSBTAG00000019663 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1666
DLDGeneProductENSBTAG00000001908 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1738
Decanoyl-CoAMetaboliteCHEBI:28493 (ChEBI)
Dihydroxyacetone PhosphateMetabolite57-04-5 (CAS)
ECHS1GeneProductENSBTAG00000017710 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1892
ECI1GeneProductENSBTAG00000009965 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1632
GCDHGeneProductENSBTAG00000016211 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2639
GK2GeneProductENSBTAG00000039245 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2712
GKGeneProductENSBTAG00000008124 (Ensembl)
  • HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2710
GPD2GeneProductENSBTAG00000009770 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2820
GlutarateMetabolite743 (PubChem-compound)
Glutaryl-CoAMetaboliteCHEBI:15524 (ChEBI)
Glyceraldehyde-3-PhosphateMetabolite591-57-1 (CAS)
GlycerolMetabolite56-81-5 (CAS)
HADHAGeneProductENSBTAG00000015038 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:3030
HADHBGeneProductENSBTAG00000010083 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:3032
HADHGeneProductENSBTAG00000002049 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:3033
HSLGeneProductENSBTAG00000038321 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:3991
Hexanoyl-CoAMetaboliteCHEBI:27540 (ChEBI)
L-Glycerol-3-PhosphateMetaboliteCHEBI:15978 (ChEBI)
LIPCGeneProductENSBTAG00000005479 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:3990
LIPFGeneProduct
LPLGeneProductENSBTAG00000012855 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:4023
Lauroyl-CoAMetabolite6244-92-4 (CAS)
Linoleoyl-CoAMetabolite40757-80-0 (CAS)
MGC142781GeneProductENSBTAG00000001932 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1384
Myristoyl-CoAMetaboliteCHEBI:15532 (ChEBI)
PNPLA2GeneProductENSBTAG00000005144 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:57104
Palmitoyl-CoAMetaboliteCHEBI:15525 (ChEBI)
SLC25A20GeneProductENSBTAG00000000191 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:788
TCA cyclePathwayWP78 (WikiPathways)
TPI1GeneProductENSBTAG00000019782 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:7167
Trans-Dec-2-enoyl-CoAMetaboliteCHEBI:10723 (ChEBI)
Trans-Hex-2-enoyl-CoAMetaboliteCHEBI:28706 (ChEBI)
Trans-Oct-2-enoyl-CoAMetaboliteCHEBI:27537 (ChEBI)
TriacylglycerolMetaboliteCHEBI:17855 (ChEBI)
cis,cis-3,6-Dodecadienoyl-CoAMetaboliteCHEBI:28002 (ChEBI)

Annotated Interactions

No annotated interactions
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