Notch Signaling Pathway (Pan troglodytes)

From WikiPathways

Revision as of 09:46, 1 December 2009 by MaintBot (Talk | contribs)
Jump to: navigation, search
MAPK signaling pathwayRas/MapS2g-secretasecomplexNICDco-repressor complexS3gene expressionNotch Intracellular DomainDNANOTCH4HDAC2RBPSUHLRFNGDTX2DLL4DTX1MAML3XR_024606.1DTX4DVL3XR_021983.1PSEN1TNFA_PANTRRBPJNUMBKAT2AKCNJ5KAT2BPTCRAHES5XR_020433.1NCSTNHDAC1DTX3NOTCH1XR_020078.1DVL2JAG2DVL1_PANTRSKIPNUMBLDTX3LCREBBPNCOR2MFNGPSEN2APH1BADAM17LFNGJAG1APH1ANOTCH2DLL1MAML1HES1


Description

No description

Comments

GenMAPP notes 
http://www.genome.jp/kegg/pathway/hsa/hsa04330.html
GenMAPP remarks 
Adapted from KEGG (right click for notes)
HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP268(r29891) with a 100% conversion rate.

Quality Tags

Ontology Terms

 

Bibliography

  1. Weinmaster G; ''The ins and outs of notch signaling.''; Mol Cell Neurosci, 1997 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
73738view09:40, 20 February 2014AndraConnected lines
69236view18:34, 8 July 2013MaintBotUpdated to 2013 gpml schema
67527view11:21, 26 June 2013DdiglesOntology Term : 'Notch signaling pathway' added !
58903view04:47, 21 February 2013MaintBotUpdated Ensembl and UniProt data source
41540view01:57, 2 March 2011MaintBotRemoved redundant pathway information and comments
35619view16:04, 12 February 2010Thomasadded literature
35618view16:03, 12 February 2010ThomasModified description
33570view09:46, 1 December 2009MaintBotRemoved group label
31596view22:07, 13 August 2009MaintBotFixed text labels
30481view21:35, 29 July 2009MaintBotNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
ADAM17GeneProductENSPTRG00000011640 (Ensembl Chimp)
APH1AGeneProductENSPTRG00000001250 (Ensembl Chimp)
APH1BGeneProductENSPTRG00000007146 (Ensembl Chimp)
CREBBPGeneProductENSPTRG00000007710 (Ensembl Chimp)
DLL1GeneProductENSPTRG00000018824 (Ensembl Chimp)
DLL4GeneProductENSPTRG00000006937 (Ensembl Chimp)
DTX1GeneProductENSPTRG00000005480 (Ensembl Chimp)
DTX2GeneProductENSPTRG00000019326 (Ensembl Chimp)
DTX3GeneProductENSPTRG00000005141 (Ensembl Chimp)
DTX3LGeneProductENSPTRG00000015295 (Ensembl Chimp)
DTX4GeneProductENSPTRG00000003688 (Ensembl Chimp)
DVL1_PANTRGeneProductENSPTRG00000000025 (Ensembl Chimp)
DVL2GeneProductENSPTRG00000008665 (Ensembl Chimp)
DVL3GeneProductENSPTRG00000015681 (Ensembl Chimp)
HDAC1GeneProductENSPTRG00000000480 (Ensembl Chimp)
HDAC2GeneProductENSPTRG00000018519 (Ensembl Chimp)
HES1GeneProductENSPTRG00000015753 (Ensembl Chimp)
HES5GeneProductENSPTRG00000024233 (Ensembl Chimp)
JAG1GeneProductENSPTRG00000013250 (Ensembl Chimp)
JAG2GeneProductENSPTRG00000006784 (Ensembl Chimp)
KAT2AGeneProductENSPTRG00000009192 (Ensembl Chimp)
KAT2BGeneProductENSPTRG00000014685 (Ensembl Chimp)
KCNJ5GeneProduct451660 (Entrez Gene)
LFNGGeneProductENSPTRG00000018864 (Ensembl Chimp)
MAML1GeneProductENSPTRG00000033932 (Ensembl Chimp)
MAML3GeneProductENSPTRG00000016459 (Ensembl Chimp)
MFNGGeneProductENSPTRG00000014335 (Ensembl Chimp)
NCOR2GeneProductENSPTRG00000005613 (Ensembl Chimp)
NCSTNGeneProductENSPTRG00000001550 (Ensembl Chimp)
NOTCH1GeneProductENSPTRG00000021561 (Ensembl Chimp)
NOTCH2GeneProductENSPTRG00000001182 (Ensembl Chimp)
NOTCH4GeneProductENSPTRG00000034379 (Ensembl Chimp)
NUMBGeneProductENSPTRG00000006513 (Ensembl Chimp)
NUMBLGeneProductENSPTRG00000011003 (Ensembl Chimp)
PSEN1GeneProductENSPTRG00000006510 (Ensembl Chimp)
PSEN2GeneProductENSPTRG00000002052 (Ensembl Chimp)
PTCRAGeneProductENSPTRG00000018176 (Ensembl Chimp)
RBPJGeneProduct461152 (Entrez Gene) aka RBP-Jkappa aka CBF1. Serves as a co-factor for the processed notch receptor after translocation to the nucleus to activate down-stream notch transcription. PMID: 15187023. In the nucleus, NIC (processed notch) regulates transcription through association with the DNA-binding protein RBP-J (also known as CBF1, KBF2, or CSL). The primary gene targets of RBP-J include members of the hairy and enhancer of split (HES) and hairy related transcription factor (HRT) families of basic-helix-loop-helix transcriptional repressors. In the absence of NIC, RBP-J actively represses transcription by way of recruitment of a corepressor complex.8 Nuclear translocation of NIC leads to dissociation of repressor proteins from RBP-J and formation of a coactivator complex.9-13. PMID: 15194757. RBP-J is a downstream target of the Notch pathway, a conserved signal transduction pathway that is important in development and cell fate determination (43). The intracellular domain (ICD) of activated Notch is released from the membrane through proteolytic cleavage and is translocated to the nucleus, where it is directed to target promoters through interaction with RBP-J (47, 68). RBP-J is a repressor in the ground state; its interaction with Notch ICD relieves this repression and turns on target genes. Interestingly, KSHV is not the only virus that has parasitized this pathway. Several viral transcription factors, e.g., EBNA2 and EBNA3 of Epstein-Barr virus and the 13S isoform of adenovirus E1A, are known to bind and activate target genes via RBP-J interactions (1, 22, 25, 26, 29). In all cases, the viral proteins target the same (central repressive) domain of RBP-J that is targeted by Notch, although KSHV RTA is capable of interactions with an additional region of RBP-J in vitro (33). RBP-J can bind RTA and recruit it to its cognate recognition site; when this happens, the activation function of RTA can relieve RBP-J-mediated repression and upregulate expression of the targeted gene. EMSA studies reveal that both sites A and C can bind to RBP-J; sequence inspection reveals that site A is a novel functional variant of known RBP-J recognition sites. 



RBPSUHLGeneProductENSPTRG00000013542 (Ensembl Chimp)
RFNGGeneProductENSPTRG00000009787 (Ensembl Chimp)
SKIPGeneProductENSPTRG00000008525 (Ensembl Chimp)
TNFA_PANTRGeneProductENSPTRG00000017965 (Ensembl Chimp)
XR_020078.1GeneProductENSPTRG00000010975 (Ensembl Chimp)
XR_020433.1GeneProductENSPTRG00000015827 (Ensembl Chimp)
XR_021983.1GeneProductENSPTRG00000003035 (Ensembl Chimp)
XR_024606.1GeneProductENSPTRG00000010617 (Ensembl Chimp)

Annotated Interactions

No annotated interactions
Personal tools