Methylation Pathways (Homo sapiens)

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(Modified description)
(Modified description)
Line 1: Line 1:
<?xml version="1.0" encoding="UTF-8"?>
<?xml version="1.0" encoding="UTF-8"?>
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<Pathway xmlns="http://pathvisio.org/GPML/2013a" Name="Methylation Pathways" Last-Modified="2/22/2013" Organism="Homo sapiens"><Comment Source="WikiPathways-description">This pathway is part the [https://assays.cancer.gov/available_assays?wp_id=WP704 CPTAC Assay Portal].</Comment>
+
<Pathway xmlns="http://pathvisio.org/GPML/2013a" Name="Methylation Pathways" Last-Modified="2/22/2013" Organism="Homo sapiens"><Comment Source="WikiPathways-description">Proteins on this pathway have targeted assays available via the [https://assays.cancer.gov/available_assays?wp_id=WP704 CPTAC Assay Portal]</Comment>
   <Comment Source="WikiPathways-category">Metabolic Process</Comment>
   <Comment Source="WikiPathways-category">Metabolic Process</Comment>
   <BiopaxRef>d0f</BiopaxRef>
   <BiopaxRef>d0f</BiopaxRef>

Revision as of 21:07, 12 September 2019

Error rendering pathway page

This revision of the pathway probably contains invalid GPML code. If this happens to the most recent revision, try reverting the pathway using the pathway history displayed below or contact the site administrators (see WikiPathways:About) to resolve this problem.

Pathway history

View all...
CompareRevisionActionTimeUserComment
106829view13:30, 17 September 2019MaintBotHMDB identifier normalization
106645view21:07, 12 September 2019KhanspersModified description
105503view05:56, 8 August 2019KhanspersModified description
88909view09:24, 17 August 2016MirellaKalafatiOntology Term : 'classic metabolic pathway' added !
79563view16:07, 25 March 2015ZariChanged ID for INMT gene
68981view17:42, 8 July 2013MaintBotUpdated to 2013 gpml schema
59186view18:51, 22 February 2013MaintBotUpdated Ensembl and UniProt data source
44906view10:26, 6 October 2011MartijnVanIerselOntology Term : 'protein modification pathway' added !
41158view23:41, 1 March 2011MaintBotRemoved redundant pathway information and comments
39758view07:23, 17 January 2011AlexanderPicomore specific title
33416view14:51, 30 November 2009MaintBotRemoved group label
30265view20:06, 25 July 2009AlexanderPico
30035view10:24, 29 June 2009Pieter GiesbertzAdded literature reference
30033view09:38, 29 June 2009Pieter GiesbertzAdded literature reference
29741view22:38, 1 June 2009KhanspersModified categories
29687view11:37, 27 May 2009Pieter GiesbertzSpecify description
29671view08:09, 26 May 2009Pieter GiesbertzAdded co-substrate synthesis
29349view07:55, 28 April 2009Pieter GiesbertzNew pathway

Error details

exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/c/c0/WP704_prev.svg:
<BR>Status:1
<BR>Message:Exception in thread "main" java.lang.NullPointerException
	at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
	at org.pathvisio.core.Engine.importPathway(Unknown Source)
	at org.pathvisio.core.util.Converter.main(Unknown Source)

<BR>Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/c/c0/WP704_prev.svg" 2>&1<BR>' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
#0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
#1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
#2 /var/www/wikipathways/wpi/extensions/Pathways/PathwayPage.php(21): Pathway->updateCache('svg')
#3 [internal function]: renderPathwayPage(Object(Parser), '<?xml version="...', Object(StripState))
#4 /var/www/wikipathways/includes/Hooks.php(125): call_user_func_array('renderPathwayPa...', Array)
#5 /var/www/wikipathways/includes/parser/Parser.php(318): wfRunHooks('ParserBeforeStr...', Array)
#6 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('<?xml version="...', Object(Title), Object(ParserOptions), true, true, 106645)
#7 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('<?xml version="...', Object(Title), true, true)
#8 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('<?xml version="...', Object(Title), true)
#9 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('<?xml version="...')
#10 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
#11 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
#12 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
#13 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
#14 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
#15 {main}
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