Metapathway biotransformation Phase I and II (Homo sapiens)

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(Modified description)
Current revision (21:04, 12 September 2019) (view source)
(Modified description)
 
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Biotransformation means chemical alteration of chemicals such as nutrients, amino acids, toxins, and drugs in the body. It is also needed to render non-polar compounds polar so that they are not reabsorbed in renal tubules and are excreted. Biotransformation of xenobiotics can dominate toxicokinetics and the metabolites may reach higher concentrations in organisms than their parent compounds. [https://en.wikipedia.org/wiki/Biotransformation]
Biotransformation means chemical alteration of chemicals such as nutrients, amino acids, toxins, and drugs in the body. It is also needed to render non-polar compounds polar so that they are not reabsorbed in renal tubules and are excreted. Biotransformation of xenobiotics can dominate toxicokinetics and the metabolites may reach higher concentrations in organisms than their parent compounds. [https://en.wikipedia.org/wiki/Biotransformation]
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This pathway is part the [https://assays.cancer.gov/available_assays?wp_id=WP702 CPTAC Assay Portal].</Comment>
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Proteins on this pathway have targeted assays available via the [https://assays.cancer.gov/available_assays?wp_id=WP702 CPTAC Assay Portal]</Comment>
   <Comment Source="WikiPathways-category">Metabolic Process</Comment>
   <Comment Source="WikiPathways-category">Metabolic Process</Comment>
   <BiopaxRef>d32</BiopaxRef>
   <BiopaxRef>d32</BiopaxRef>

Current revision

Error rendering pathway page

This revision of the pathway probably contains invalid GPML code. If this happens to the most recent revision, try reverting the pathway using the pathway history displayed below or contact the site administrators (see WikiPathways:About) to resolve this problem.

Pathway history

View all...
CompareRevisionActionTimeUserComment
106643view21:04, 12 September 2019KhanspersModified description
105646view05:10, 10 August 2019KhanspersModified description
102200view07:26, 9 December 2018EgonwMmm... only the ENSG00000277656 link works.
102197view06:56, 9 December 2018EgonwUndo revision 102196 by [[Special:Contributions/Egonw|Egonw]] ([[User talk:Egonw|Talk]])
102196view06:55, 9 December 2018EgonwMapable ID.
102195view06:54, 9 December 2018EgonwReplaced an outdated Ensembl identifiers with the new one.
98553view18:18, 16 September 2018AlexanderPicoupdated outdated ensembl
96892view13:47, 18 April 2018FehrhartAdded annotations for CYP450
96046view16:07, 15 February 2018DeSlModified description
96045view16:06, 15 February 2018DeSlOntology Term : 'phase II biotransformation pathway' added !
96044view16:06, 15 February 2018DeSlOntology Term : 'phase I biotransformation pathway via cytochrome P450' added !
96043view16:05, 15 February 2018DeSlModified title
96042view16:03, 15 February 2018DeSlModified title
96041view16:03, 15 February 2018DeSlAdded lit. ref
73516view23:21, 29 January 2014KhanspersModified title
68908view17:30, 8 July 2013MaintBotUpdated to 2013 gpml schema
67458view11:04, 26 June 2013DdiglesOntology Term : 'cellular detoxification pathway' added !
59107view22:20, 21 February 2013MaintBotUpdated Ensembl and UniProt data source
44905view10:25, 6 October 2011MartijnVanIerselOntology Term : 'phase I biotransformation pathway' added !
41055view23:17, 1 March 2011MaintBotRemoved redundant pathway information and comments
34448view18:21, 10 December 2009MaintBotAutomatic update of empty xrefs
33415view14:50, 30 November 2009MaintBotRemoved group label
33182view17:47, 5 November 2009KhanspersModified categories
29945view16:15, 14 June 2009Pieter GiesbertzSpecify description
29944view16:09, 14 June 2009Pieter Giesbertzminor changes
29942view12:30, 14 June 2009Pieter GiesbertzAdded aa acyltransferase genes
29941view12:17, 14 June 2009Pieter GiesbertzSpecify description
29940view12:03, 14 June 2009Pieter GiesbertzSpecify description
29939view19:30, 13 June 2009Pieter GiesbertzAdded biotransformation genes
29938view19:21, 13 June 2009Pieter GiesbertzSpecify description
29937view19:20, 13 June 2009Pieter GiesbertzSpecify description
29936view19:06, 13 June 2009Pieter GiesbertzSpecify description
29935view19:05, 13 June 2009Pieter GiesbertzSpecify description
29934view18:42, 13 June 2009Pieter GiesbertzSpecify description
29931view18:41, 13 June 2009Pieter GiesbertzSpecify description
29930view18:36, 13 June 2009Pieter GiesbertzSpecify description
29929view18:07, 13 June 2009Pieter GiesbertzSpecify description
29928view18:02, 13 June 2009Pieter GiesbertzAdded CYPs
29927view17:58, 13 June 2009Pieter GiesbertzSpecify description
29926view17:47, 13 June 2009Pieter GiesbertzSpecify description
29925view17:43, 13 June 2009Pieter GiesbertzSpecify description
29357view10:05, 29 April 2009Pieter GiesbertzSpecify description
29356view10:05, 29 April 2009Pieter GiesbertzSpecify description
29355view10:03, 29 April 2009Pieter GiesbertzAdded methyltransferases
29340view13:42, 27 April 2009Pieter GiesbertzAdded coloured association pathway
29324view08:23, 24 April 2009Pieter GiesbertzNew pathway

Error details

exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/5/5c/WP702_prev.svg:
<BR>Status:1
<BR>Message:Exception in thread "main" java.lang.NullPointerException
	at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
	at org.pathvisio.core.Engine.importPathway(Unknown Source)
	at org.pathvisio.core.util.Converter.main(Unknown Source)

<BR>Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/5/5c/WP702_prev.svg" 2>&1<BR>' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
#0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
#1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
#2 /var/www/wikipathways/wpi/extensions/Pathways/PathwayPage.php(21): Pathway->updateCache('svg')
#3 [internal function]: renderPathwayPage(Object(Parser), '<?xml version="...', Object(StripState))
#4 /var/www/wikipathways/includes/Hooks.php(125): call_user_func_array('renderPathwayPa...', Array)
#5 /var/www/wikipathways/includes/parser/Parser.php(318): wfRunHooks('ParserBeforeStr...', Array)
#6 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('<?xml version="...', Object(Title), Object(ParserOptions), true, true, 106643)
#7 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('<?xml version="...', Object(Title), true, true)
#8 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('<?xml version="...', Object(Title), true)
#9 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('<?xml version="...')
#10 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
#11 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
#12 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
#13 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
#14 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
#15 {main}
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