Catalytic cycle of mammalian Flavin-containing MonoOxygenases (FMOs) (Homo sapiens)

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(HMDB identifier normalization)
Current revision (09:33, 10 November 2019) (view source)
(Replaced a sub-optimal PubChem CID with a ChEBI identifier.)
 
Line 68: Line 68:
   <DataNode TextLabel="FADH2" GraphId="f4048" Type="Metabolite" GroupRef="fe818">
   <DataNode TextLabel="FADH2" GraphId="f4048" Type="Metabolite" GroupRef="fe818">
     <Graphics CenterX="247.0" CenterY="362.0" Width="80.0" Height="20.0" ZOrder="32768" FontSize="10" Valign="Middle" Color="0000ff" />
     <Graphics CenterX="247.0" CenterY="362.0" Width="80.0" Height="20.0" ZOrder="32768" FontSize="10" Valign="Middle" Color="0000ff" />
-
     <Xref Database="PubChem-compound" ID="25244872" />
+
     <Xref Database="ChEBI" ID="CHEBI:17877" />
   </DataNode>
   </DataNode>
   <DataNode TextLabel="FAD-OOH" GraphId="fa807" Type="Metabolite" GroupRef="c4d6f">
   <DataNode TextLabel="FAD-OOH" GraphId="fa807" Type="Metabolite" GroupRef="c4d6f">

Current revision

Error rendering pathway page

This revision of the pathway probably contains invalid GPML code. If this happens to the most recent revision, try reverting the pathway using the pathway history displayed below or contact the site administrators (see WikiPathways:About) to resolve this problem.

Pathway history

View all...
CompareRevisionActionTimeUserComment
107912view09:33, 10 November 2019EgonwReplaced a sub-optimal PubChem CID with a ChEBI identifier.
106823view13:30, 17 September 2019MaintBotHMDB identifier normalization
94198view14:44, 25 August 2017DeSlAdded ID for FAD-OH
94195view14:38, 25 August 2017DeSlChanged metabolite nodes into textlabels, since they were not metabolites.
84769view16:25, 17 March 2016EveloModified title
79222view13:47, 15 March 2015EgonwReplaced the HMDB H2 identifier with H+ from ChEBI.
63157view20:18, 8 May 2013MaintBotUpdating gpml version
59115view22:27, 21 February 2013MaintBotUpdated Ensembl and UniProt data source
48246view06:16, 17 May 2012MaintBotUpdating PubChem xrefs
44984view14:33, 6 October 2011MartijnVanIerselOntology Term : 'cellular detoxification pathway' added !
41065view23:18, 1 March 2011MaintBotRemoved redundant pathway information and comments
34638view19:41, 7 January 2010KhanspersModified categories
33407view14:49, 30 November 2009MaintBotRemoved group label
30258view04:47, 25 July 2009AlexanderPicoModified categories
29954view06:26, 15 June 2009Pieter GiesbertzSpecify description
29591view11:49, 19 May 2009Pieter GiesbertzAdded datanodes
29590view10:26, 19 May 2009Pieter GiesbertzModified description
29507view07:54, 11 May 2009Pieter GiesbertzAdded literature reference
29506view07:26, 11 May 2009Pieter GiesbertzAdded literature references
29290view08:53, 22 April 2009Pieter GiesbertzSpecify description
29280view07:38, 22 April 2009Pieter GiesbertzSpecify description
29255view11:29, 20 April 2009Pieter GiesbertzSpecify description
29234view07:57, 17 April 2009Pieter GiesbertzSpecify description
29155view10:52, 8 April 2009Pieter GiesbertzSpecify description
29151view09:57, 7 April 2009Pieter GiesbertzSpecify description
29150view09:56, 7 April 2009Pieter GiesbertzSpecify description
29107view14:14, 2 April 2009Pieter GiesbertzSpecify description
29106view14:12, 2 April 2009Pieter GiesbertzPeriodical save, work in progress
29105view14:01, 2 April 2009Pieter GiesbertzSpecify description
29104view12:08, 2 April 2009Pieter GiesbertzSpecify description
29103view11:57, 2 April 2009Pieter GiesbertzSpecify description
29102view11:56, 2 April 2009Pieter GiesbertzSpecify description
29101view11:50, 2 April 2009Pieter GiesbertzPeriodical save, work in progress
29100view11:42, 2 April 2009Pieter GiesbertzSpecify description
29099view11:33, 2 April 2009Pieter GiesbertzSpecify description
29098view11:19, 2 April 2009Pieter GiesbertzSpecify description
29097view10:51, 2 April 2009Pieter GiesbertzSpecify description
29096view09:32, 2 April 2009Pieter GiesbertzPeriodical save, work in progress
29095view09:22, 2 April 2009Pieter GiesbertzPeriodical save, work in progress
29094view09:10, 2 April 2009Pieter GiesbertzPeriodical save, work in progress
29093view08:57, 2 April 2009Pieter GiesbertzPeriodical save, work in progress
29092view08:46, 2 April 2009Pieter GiesbertzPeriodical save, work in progress
29091view08:06, 2 April 2009Pieter GiesbertzPeriodical save, work in progress
29090view07:31, 2 April 2009Pieter GiesbertzPeriodical save, work in progress
29081view14:56, 31 March 2009Pieter GiesbertzCatalytic cycle of mammalian FMOs
29080view14:48, 31 March 2009Pieter GiesbertzPeriodical save, work in progress
29079view14:38, 31 March 2009Pieter GiesbertzNew pathway

Error details

exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/d/d6/WP688_prev.svg:
<BR>Status:1
<BR>Message:Exception in thread "main" java.lang.NullPointerException
	at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
	at org.pathvisio.core.Engine.importPathway(Unknown Source)
	at org.pathvisio.core.util.Converter.main(Unknown Source)

<BR>Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/d/d6/WP688_prev.svg" 2>&1<BR>' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
#0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
#1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
#2 /var/www/wikipathways/wpi/extensions/Pathways/PathwayPage.php(21): Pathway->updateCache('svg')
#3 [internal function]: renderPathwayPage(Object(Parser), '<?xml version="...', Object(StripState))
#4 /var/www/wikipathways/includes/Hooks.php(125): call_user_func_array('renderPathwayPa...', Array)
#5 /var/www/wikipathways/includes/parser/Parser.php(318): wfRunHooks('ParserBeforeStr...', Array)
#6 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('<?xml version="...', Object(Title), Object(ParserOptions), true, true, 107912)
#7 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('<?xml version="...', Object(Title), true, true)
#8 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('<?xml version="...', Object(Title), true)
#9 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('<?xml version="...')
#10 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
#11 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
#12 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
#13 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
#14 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
#15 {main}
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