Oxidative phosphorylation (Homo sapiens)

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(Modified description)
Current revision (12:10, 16 August 2019) (view source)
(HMDB identifier normalization)
 
Line 14: Line 14:
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     <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="c4d">
     <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="c4d">
Line 417: Line 435:
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Porter RK</bp:AUTHORS>
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Porter RK</bp:AUTHORS>
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Brand MD</bp:AUTHORS>
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Brand MD</bp:AUTHORS>
-
    </bp:PublicationXref>
 
-
    <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="f60">
 
-
      <bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string">14641005</bp:ID>
 
-
      <bp:DB rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</bp:DB>
 
-
      <bp:TITLE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The molecular machinery of Keilin's respiratory chain.</bp:TITLE>
 
-
      <bp:SOURCE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Biochem Soc Trans</bp:SOURCE>
 
-
      <bp:YEAR rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2003</bp:YEAR>
 
-
      <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Rich PR</bp:AUTHORS>
 
-
    </bp:PublicationXref>
 
-
    <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="dc8">
 
-
      <bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string">388618</bp:ID>
 
-
      <bp:DB rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</bp:DB>
 
-
      <bp:TITLE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Keilin's respiratory chain concept and its chemiosmotic consequences.</bp:TITLE>
 
-
      <bp:SOURCE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Science</bp:SOURCE>
 
-
      <bp:YEAR rdf:datatype="http://www.w3.org/2001/XMLSchema#string">1979</bp:YEAR>
 
-
      <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Mitchell P</bp:AUTHORS>
 
     </bp:PublicationXref>
     </bp:PublicationXref>
     <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="b84">
     <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="b84">
Line 449: Line 451:
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Rutkowski P</bp:AUTHORS>
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Rutkowski P</bp:AUTHORS>
     </bp:PublicationXref>
     </bp:PublicationXref>
-
     <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="aac">
+
     <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="a9c">
-
       <bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string">15869601</bp:ID>
+
       <bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string">11340051</bp:ID>
       <bp:DB rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</bp:DB>
       <bp:DB rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</bp:DB>
-
       <bp:TITLE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Lipid rafts are required in Galpha(i) signaling downstream of the P2Y12 receptor during ADP-mediated platelet activation.</bp:TITLE>
+
       <bp:TITLE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Structures and proton-pumping strategies of mitochondrial respiratory enzymes.</bp:TITLE>
-
       <bp:SOURCE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">J Thromb Haemost</bp:SOURCE>
+
       <bp:SOURCE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Annu Rev Biophys Biomol Struct</bp:SOURCE>
-
       <bp:YEAR rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2005</bp:YEAR>
+
       <bp:YEAR rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2001</bp:YEAR>
-
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Quinton TM</bp:AUTHORS>
+
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Schultz BE</bp:AUTHORS>
-
      <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Kim S</bp:AUTHORS>
+
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Chan SI</bp:AUTHORS>
-
      <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Jin J</bp:AUTHORS>
+
-
       <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Kunapuli SP</bp:AUTHORS>
+
     </bp:PublicationXref>
     </bp:PublicationXref>
   </Biopax>
   </Biopax>
</Pathway>
</Pathway>

Current revision

Error rendering pathway page

This revision of the pathway probably contains invalid GPML code. If this happens to the most recent revision, try reverting the pathway using the pathway history displayed below or contact the site administrators (see WikiPathways:About) to resolve this problem.

Pathway history

View all...
CompareRevisionActionTimeUserComment
106209view12:10, 16 August 2019MaintBotHMDB identifier normalization
105773view19:40, 15 August 2019KhanspersModified description
96245view13:43, 2 March 2018Fehrhartcorrected stacking of nodes
96197view15:43, 25 February 2018EgonwPretty sure this should be H+
96023view15:30, 15 February 2018DeSlRemoved licence number and last modified part.
96022view15:29, 15 February 2018DeSlModified description
86899view07:58, 14 July 2016MkutmonOntology Term : 'oxidative phosphorylation pathway' added !
86898view07:58, 14 July 2016MkutmonOntology Term : 'PW:0000034' removed !
79961view13:33, 28 April 2015ZariChanged LOC727762 to new Id
79520view09:43, 24 March 2015Zariadded Entrez ID for GZMB
68894view17:28, 8 July 2013MaintBotUpdated to 2013 gpml schema
59095view22:10, 21 February 2013MaintBotUpdated Ensembl and UniProt data source
46087view02:24, 15 December 2011AllanKuchinskyupdated HGNC IDs
45305view20:01, 7 October 2011KhanspersOntology Term : 'oxidative phosphorylation pathway' added !
41046view23:16, 1 March 2011MaintBotRemoved redundant pathway information and comments
38777view00:02, 24 September 2010AlexanderPicobeautification
32171view14:08, 14 August 2009MaintBotFixed group labels
29958view13:40, 17 June 2009AndraAdded references from Wikipedia
29743view22:40, 1 June 2009KhanspersModified categories
29613view12:11, 23 May 2009MartijnVanIerselUpdated ensembl references
28181view13:49, 30 January 2009AndraPeriodical save, work in progress
28180view13:39, 30 January 2009AndraPeriodical save, work in progress
28179view12:02, 30 January 2009Andratemp save
28176view16:46, 29 January 2009AndraGenes involved in ATP synthase production added
28175view16:36, 29 January 2009AndraPeriodical save, work in progress
28174view16:26, 29 January 2009AndraPeriodical save, work in progress
28173view16:16, 29 January 2009AndraPeriodical save, work in progress
28172view16:06, 29 January 2009AndraPeriodical save, work in progress
28171view15:55, 29 January 2009AndraPeriodical save, work in progress
28170view15:44, 29 January 2009AndraPeriodical save, work in progress
28169view15:25, 29 January 2009AndraCreation of a stub
28168view15:19, 29 January 2009AndraPeriodical save, work in progress
28167view15:09, 29 January 2009AndraNew pathway

Error details

exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/2/25/WP623_prev.svg:
<BR>Status:1
<BR>Message:Exception in thread "main" java.lang.NullPointerException
	at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
	at org.pathvisio.core.Engine.importPathway(Unknown Source)
	at org.pathvisio.core.util.Converter.main(Unknown Source)

<BR>Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/2/25/WP623_prev.svg" 2>&1<BR>' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
#0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
#1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
#2 /var/www/wikipathways/wpi/extensions/Pathways/PathwayPage.php(21): Pathway->updateCache('svg')
#3 [internal function]: renderPathwayPage(Object(Parser), '<?xml version="...', Object(StripState))
#4 /var/www/wikipathways/includes/Hooks.php(125): call_user_func_array('renderPathwayPa...', Array)
#5 /var/www/wikipathways/includes/parser/Parser.php(318): wfRunHooks('ParserBeforeStr...', Array)
#6 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('<?xml version="...', Object(Title), Object(ParserOptions), true, true, 106209)
#7 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('<?xml version="...', Object(Title), true, true)
#8 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('<?xml version="...', Object(Title), true)
#9 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('<?xml version="...')
#10 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
#11 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
#12 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
#13 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
#14 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
#15 {main}
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