HIPK2 in kidney fibrosis (Homo sapiens)
From WikiPathways
(Difference between revisions)
Current revision (16:55, 4 December 2019) (view source) |
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<Comment Source="WikiPathways-description">This pathway was adapted from Figure 6i of PMID: 22406746</Comment> | <Comment Source="WikiPathways-description">This pathway was adapted from Figure 6i of PMID: 22406746</Comment> | ||
<BiopaxRef>bc9</BiopaxRef> | <BiopaxRef>bc9</BiopaxRef> | ||
- | <Graphics BoardWidth=" | + | <Graphics BoardWidth="867.5" BoardHeight="665.0" /> |
<DataNode TextLabel="SIAH1" GraphId="e3933" Type="GeneProduct"> | <DataNode TextLabel="SIAH1" GraphId="e3933" Type="GeneProduct"> | ||
<Graphics CenterX="500.0" CenterY="100.0" Width="75.0" Height="25.0" ZOrder="32768" FontSize="12" Valign="Middle" /> | <Graphics CenterX="500.0" CenterY="100.0" Width="75.0" Height="25.0" ZOrder="32768" FontSize="12" Valign="Middle" /> | ||
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<Xref Database="Entrez Gene" ID="28996" /> | <Xref Database="Entrez Gene" ID="28996" /> | ||
</DataNode> | </DataNode> | ||
- | <DataNode TextLabel=" | + | <DataNode TextLabel="Wnt / B-catenin" GraphId="dc5e1" Type="Pathway"> |
<Graphics CenterX="200.0" CenterY="350.0" Width="100.0" Height="25.0" ZOrder="32770" FontWeight="Bold" FontSize="12" Valign="Middle" ShapeType="None" Color="14961e" /> | <Graphics CenterX="200.0" CenterY="350.0" Width="100.0" Height="25.0" ZOrder="32770" FontWeight="Bold" FontSize="12" Valign="Middle" ShapeType="None" Color="14961e" /> | ||
<Xref Database="WikiPathways" ID="WP4150" /> | <Xref Database="WikiPathways" ID="WP4150" /> | ||
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<InfoBox CenterX="0.0" CenterY="0.0" /> | <InfoBox CenterX="0.0" CenterY="0.0" /> | ||
<Biopax> | <Biopax> | ||
+ | <bp:openControlledVocabulary xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#"> | ||
+ | <bp:TERM xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">kidney disease pathway</bp:TERM> | ||
+ | <bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PW:0000300</bp:ID> | ||
+ | <bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pathway Ontology</bp:Ontology> | ||
+ | </bp:openControlledVocabulary> | ||
+ | <bp:openControlledVocabulary xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#"> | ||
+ | <bp:TERM xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">renal fibrosis</bp:TERM> | ||
+ | <bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DOID:0050855</bp:ID> | ||
+ | <bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Disease</bp:Ontology> | ||
+ | </bp:openControlledVocabulary> | ||
<bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="bc9"> | <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="bc9"> | ||
<bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string">22406746</bp:ID> | <bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string">22406746</bp:ID> | ||
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<bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">He JC</bp:AUTHORS> | <bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">He JC</bp:AUTHORS> | ||
</bp:PublicationXref> | </bp:PublicationXref> | ||
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</Biopax> | </Biopax> | ||
</Pathway> | </Pathway> |
Current revision
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Error details
exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/4/44/WP4751_prev.svg: <BR>Status:1 <BR>Message:Exception in thread "main" java.lang.NullPointerException at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source) at org.pathvisio.core.Engine.importPathway(Unknown Source) at org.pathvisio.core.util.Converter.main(Unknown Source) <BR>Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/4/44/WP4751_prev.svg" 2>&1<BR>' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255 Stack trace: #0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...') #1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg') #2 /var/www/wikipathways/wpi/extensions/Pathways/PathwayPage.php(21): Pathway->updateCache('svg') #3 [internal function]: renderPathwayPage(Object(Parser), '<?xml version="...', Object(StripState)) #4 /var/www/wikipathways/includes/Hooks.php(125): call_user_func_array('renderPathwayPa...', Array) #5 /var/www/wikipathways/includes/parser/Parser.php(318): wfRunHooks('ParserBeforeStr...', Array) #6 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('<?xml version="...', Object(Title), Object(ParserOptions), true, true, 108288) #7 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('<?xml version="...', Object(Title), true, true) #8 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('<?xml version="...', Object(Title), true) #9 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('<?xml version="...') #10 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision() #11 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false) #12 /var/www/wikipathways/includes/Wiki.php(437): Article->view() #13 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest)) #14 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest)) #15 {main}