Ketogenesis (Homo sapiens)

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(Modified description)
Current revision (12:00, 10 November 2019) (view source)
(Replaced secondary ChEBI identifiers with a primary identifiers.)
 
Line 4: Line 4:
   <DataNode TextLabel="Acetyl-CoA" GraphId="a4c93" Type="Metabolite">
   <DataNode TextLabel="Acetyl-CoA" GraphId="a4c93" Type="Metabolite">
     <Graphics CenterX="221.75" CenterY="210.75" Width="128.5" Height="32.5" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
     <Graphics CenterX="221.75" CenterY="210.75" Width="128.5" Height="32.5" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
-
     <Xref Database="ChEBI" ID="CHEBI:2408"/>
+
     <Xref Database="ChEBI" ID="CHEBI:15351"/>
   </DataNode>
   </DataNode>
   <DataNode TextLabel="Acetoacetyl-CoA" GraphId="a7a9f" Type="Metabolite">
   <DataNode TextLabel="Acetoacetyl-CoA" GraphId="a7a9f" Type="Metabolite">
     <Graphics CenterX="321.75" CenterY="310.75" Width="124.5" Height="32.5" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
     <Graphics CenterX="321.75" CenterY="310.75" Width="124.5" Height="32.5" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
-
     <Xref Database="ChEBI" ID="CHEBI:2392"/>
+
     <Xref Database="ChEBI" ID="CHEBI:15345"/>
   </DataNode>
   </DataNode>
   <DataNode TextLabel="NADH2" GraphId="b9854" Type="Metabolite">
   <DataNode TextLabel="NADH2" GraphId="b9854" Type="Metabolite">
Line 20: Line 20:
   <DataNode TextLabel="CoASH" GraphId="c4789" Type="Metabolite">
   <DataNode TextLabel="CoASH" GraphId="c4789" Type="Metabolite">
     <Graphics CenterX="157.0" CenterY="311.0" Width="90.0" Height="25.0" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
     <Graphics CenterX="157.0" CenterY="311.0" Width="90.0" Height="25.0" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
-
     <Xref Database="ChEBI" ID="CHEBI:13298"/>
+
     <Xref Database="ChEBI" ID="CHEBI:15346"/>
   </DataNode>
   </DataNode>
   <DataNode TextLabel="HMGCL" GraphId="da267" Type="GeneProduct">
   <DataNode TextLabel="HMGCL" GraphId="da267" Type="GeneProduct">
Line 40: Line 40:
   <DataNode TextLabel="HMG-CoA" GraphId="f36fe" Type="Metabolite">
   <DataNode TextLabel="HMG-CoA" GraphId="f36fe" Type="Metabolite">
     <Graphics CenterX="507.75" CenterY="475.25" Width="162.5" Height="29.5" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
     <Graphics CenterX="507.75" CenterY="475.25" Width="162.5" Height="29.5" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
-
     <Xref Database="ChEBI" ID="CHEBI:392"/>
+
     <Xref Database="ChEBI" ID="CHEBI:15467"/>
   </DataNode>
   </DataNode>
   <DataNode TextLabel="NAD+" GraphId="f6912" Type="Metabolite">
   <DataNode TextLabel="NAD+" GraphId="f6912" Type="Metabolite">
Line 52: Line 52:
   <DataNode TextLabel="Acetyl-CoA" GraphId="d2b2c" Type="Metabolite">
   <DataNode TextLabel="Acetyl-CoA" GraphId="d2b2c" Type="Metabolite">
     <Graphics CenterX="764.0" CenterY="557.0" Width="148.0" Height="38.0" ZOrder="32769" FontSize="12" Valign="Middle" Color="0000ff"/>
     <Graphics CenterX="764.0" CenterY="557.0" Width="148.0" Height="38.0" ZOrder="32769" FontSize="12" Valign="Middle" Color="0000ff"/>
-
     <Xref Database="ChEBI" ID="CHEBI:2408"/>
+
     <Xref Database="ChEBI" ID="CHEBI:15351"/>
   </DataNode>
   </DataNode>
   <DataNode TextLabel="CoASH" GraphId="d3ac5" Type="Metabolite">
   <DataNode TextLabel="CoASH" GraphId="d3ac5" Type="Metabolite">
     <Graphics CenterX="335.0" CenterY="458.0" Width="90.0" Height="25.0" ZOrder="32770" FontSize="12" Valign="Middle" Color="0000ff"/>
     <Graphics CenterX="335.0" CenterY="458.0" Width="90.0" Height="25.0" ZOrder="32770" FontSize="12" Valign="Middle" Color="0000ff"/>
-
     <Xref Database="ChEBI" ID="CHEBI:13298"/>
+
     <Xref Database="ChEBI" ID="CHEBI:15346"/>
   </DataNode>
   </DataNode>
   <DataNode TextLabel="Acetyl-CoA" GraphId="a093a" Type="Metabolite">
   <DataNode TextLabel="Acetyl-CoA" GraphId="a093a" Type="Metabolite">
     <Graphics CenterX="272.5" CenterY="398.5" Width="97.0" Height="23.0" ZOrder="32771" FontSize="12" Valign="Middle" Color="0000ff"/>
     <Graphics CenterX="272.5" CenterY="398.5" Width="97.0" Height="23.0" ZOrder="32771" FontSize="12" Valign="Middle" Color="0000ff"/>
-
     <Xref Database="ChEBI" ID="CHEBI:2408"/>
+
     <Xref Database="ChEBI" ID="CHEBI:15351"/>
   </DataNode>
   </DataNode>
   <Interaction>
   <Interaction>

Current revision

Error rendering pathway page

This revision of the pathway probably contains invalid GPML code. If this happens to the most recent revision, try reverting the pathway using the pathway history displayed below or contact the site administrators (see WikiPathways:About) to resolve this problem.

Pathway history

CompareRevisionActionTimeUserComment
107915view12:00, 10 November 2019EgonwReplaced secondary ChEBI identifiers with a primary identifiers.
107897view15:01, 9 November 2019MaijaUModified description
107896view14:46, 9 November 2019MaijaUNew pathway

Error details

exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/e/e8/WP4741_prev.svg:
<BR>Status:1
<BR>Message:Exception in thread "main" java.lang.NullPointerException
	at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
	at org.pathvisio.core.Engine.importPathway(Unknown Source)
	at org.pathvisio.core.util.Converter.main(Unknown Source)

<BR>Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/e/e8/WP4741_prev.svg" 2>&1<BR>' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
#0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
#1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
#2 /var/www/wikipathways/wpi/extensions/Pathways/PathwayPage.php(21): Pathway->updateCache('svg')
#3 [internal function]: renderPathwayPage(Object(Parser), '<?xml version="...', Object(StripState))
#4 /var/www/wikipathways/includes/Hooks.php(125): call_user_func_array('renderPathwayPa...', Array)
#5 /var/www/wikipathways/includes/parser/Parser.php(318): wfRunHooks('ParserBeforeStr...', Array)
#6 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('<?xml version="...', Object(Title), Object(ParserOptions), true, true, 107915)
#7 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('<?xml version="...', Object(Title), true, true)
#8 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('<?xml version="...', Object(Title), true)
#9 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('<?xml version="...')
#10 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
#11 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
#12 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
#13 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
#14 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
#15 {main}
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