Plant cell processes (Glycine max)

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Electron transport/movementUnstable intermediates decayCytochrome fFe-S complex FxMetabolitePhotosystem IOxygen-evolving complexDihydrolipoyl transacetylaseAminomethyltransferaseS-AminomethyldihydrolipoylGlycolate-glycerate translocatore-2-hydroxyethylthiamine pyrophosphateErythrose 4-phosphatePhosphopentose isomeraseATP synthaseDihydroxyacetone phosphateHeme b(n)LactateRibulose 1,5-bisphosphatePlastoquinoneThioredoxinSemiquinoneSerineH+Sedoheptulose5,10-methylenetetrahydrofolatePhosphopentose epimeraseFerredoxinGlycine dehydrogenaseH2OSedoheptulose 1,7-bisphosphateRieske proteinHeme b(p)H+AldolaseFerredoxin-NADP+ reductaseFructose 1,6-bisphosphatePiGlycerate kinaseDihydrolipoamidePhosphoribulokinaseAmino acid translocatorNADPHCalvin cycleTriose phosphate isomeraseGlyceraldehyde-3-phosphatedehydrogenaseGlycine hydroxymethyltransferasePhotons3-phosphoglycerateDihydrolipoyl transacetylaseGlutamic acidSedoheptulokinaseDihydrolipoylLactate dehydrogenaseP700 reaction centerGlutamate-glyoxylate aminotransferase2-phosphoglycolateLipoylSemiquinoneGlycine cleavageGlucose-6-phosphataseCatalaseChlorophyllPlastoquinolChlorophyll A0Glucose-6-phosphate isomerase2-phosphoglycerateAldose 1-epimeraseHydroxypyruvateNADP+GlycinePiTransketolaseFructose 1,6-bisphosphatasePhosphoglycerate kinasePlastoquinoneQuinoneP680 reaction centerPyruvate dehydrogenaseHydroxypyruvate reductaseHexokinaseH+Photosystem IIGlycolaldehydeFe-S complex FbPhosphofructokinase1,3-bisphosphoglyceratePyruvate decarboxylaseH2OPhylloquinone A1AcetaldehydeLight-dependent reactionsLight-harvesting proteinsGlycolateADPGlycerateAcetyl-dihydrolipoamidePlastocyaninPhosphoglycerate mutaseDihydrolipoamide dehydrogenaseATPPhosphoglycolate phosphataseH+Fructose 6-phosphateSerine-glyoxylate transaminasePhotonsSedoheptulose 1,7-bisphosphatasePhosphoenolpyruvateH+MitochondrionH-proteinCytochrome b6f3-keto-2-carboxyarabinitol-1,5-bisphosphateGlyoxylate2-oxoglutarateTransketolaseAldolaseH+Light-harvesting complexEnolaseFe-S complex FaSedoheptulose 7-phosphateRibulose 5-phosphatePheophytinTriose phosphate translocatorGlycolate oxidaseO2H+O2CO23-keto-2-dioxyarabinitol-1,5-bisphosphateH2OATPADPGlyceraldehyde 3-phosphateNADPHNADP+H+PiH2OPiGlycolaldehydeXylulose 5-phosphateH2OPiRibose 5-phosphateATPADPPlastoquinoneATPADPH2OPiGlycolateO2H2O2OGlycineCO2NH3TetrahydrofolateNAD+NADHH+RuBisCOSerineGlyoxylateGlycineNAD+NADHH+GlycerateATPADPThylakoid lumenStromaDihydroxyacetone phosphateGlyceraldehyde 3-phosphatePiTriose phosphate isomeraseGlyceraldehyde-3-phosphatedehydrogenasePhosphoglycerate kinase3-phosphoglycerateATPADP1,3-bisphosphoglycerateH2OPyruvatePyruvate kinaseADPATPH+Beta-D-Fructose 1,6-bisphosphateAldolaseBeta-D-Fructose 6-phosphatePiPPiAlpha-D-Glucose 6-phosphateNAD+NADHH+Alpha-D-GlucoseATPADPH+Beta-D-GlucoseBeta-D-Glucose 6-phosphateHexokinaseATPADPH+Glucose-6-phosphate 1-epimeraseAmino acid translocatorGlycolate-glycerate translocatorPyruvate translocaseH+H+PyruvateThiamine pyrophosphateThiamine pyrophosphateLipoamideCoenzyme ADihydrolipoamideTetrahydrofolateGlycineDihydrolipoamide dehydrogenaseLipoamideNAD+NADH


Description

Processes in a plant cell, starting from the light reactions of photosynthesis.

Quality Tags

Ontology Terms

 

Bibliography

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History

View all...
CompareRevisionActionTimeUserComment
95370view15:43, 10 December 2017Marvin M2Changed a line into a graphical line, as was the purpose of this line.
91924view04:55, 6 April 2017MaintBotconnected interactions and removed extra node
91656view21:17, 28 March 2017Kyros12
91643view12:48, 28 March 2017Kyros12
91640view13:36, 27 March 2017Kyros12-minor changes
91637view10:41, 27 March 2017Kyros12
91634view08:58, 26 March 2017Kyros12-citric acid cycle
91633view04:32, 26 March 2017Kyros12-pyruvate decarboxylation
91632view18:08, 25 March 2017Kyros12
91631view18:08, 25 March 2017Kyros12-pyruvate dehydrogenase
91628view08:15, 25 March 2017Kyros12
91627view06:22, 25 March 2017Kyros12-glycolysis
91624view19:36, 24 March 2017Khanspersconnected interactions
91322view13:21, 28 January 2017Kyros12-starting work on glycolysis
91318view00:04, 28 January 2017Khanspersremoved one more empty node
91317view00:02, 28 January 2017Khanspersremoved two more empty nodes
91316view00:00, 28 January 2017Khanspersremoved empty gene node
91315view23:58, 27 January 2017Khanspersupdated board width height
91314view23:56, 27 January 2017Khanspersfixed white space issue
91308view18:49, 26 January 2017KhanspersOntology Term : 'photosynthesis pathway' added !
91048view11:30, 27 December 2016Kyros12Periodical save, work in progress
91045view00:44, 27 December 2016Kyros12-alignment
91041view06:41, 26 December 2016Kyros12-photorespiration
91040view03:12, 26 December 2016Kyros12-glycine cleavage
91038view10:13, 25 December 2016Kyros12-photorespiration
91036view11:41, 24 December 2016Kyros12Periodical save, work in progress
91035view08:17, 24 December 2016Kyros12-revamped first part of calvin cycle
91034view20:21, 23 December 2016Kyros12Periodical save, work in progress
91033view08:28, 23 December 2016Kyros12-photorespiration 2
91032view08:09, 23 December 2016Kyros12Periodical save, work in progress
91022view09:50, 22 December 2016Kyros12-photorespiration added
91021view04:57, 22 December 2016Kyros12Periodical save, work in progress
91020view01:34, 22 December 2016Kyros12-calvin cycle additions
91019view12:00, 21 December 2016Kyros12Periodical save, work in progress
91018view09:12, 21 December 2016Kyros12-0001
91017view08:18, 21 December 2016Kyros12Periodical save, work in progress
91015view05:42, 21 December 2016Kyros12-calvin cycle completion
91014view05:13, 21 December 2016Kyros12Periodical save, work in progress
91013view04:03, 21 December 2016Kyros12Periodical save, work in progress
91012view03:23, 21 December 2016Kyros12Periodical save, work in progress
91011view03:06, 21 December 2016Kyros12Periodical save, work in progress
91007view13:50, 20 December 2016Kyros12-light-independent cycle
91006view13:41, 20 December 2016Kyros12Periodical save, work in progress
91003view12:51, 20 December 2016Kyros12Periodical save, work in progress
91001view12:21, 20 December 2016Kyros12Periodical save, work in progress
91000view11:51, 20 December 2016Kyros12Periodical save, work in progress
90999view11:13, 20 December 2016Kyros12Periodical save, work in progress
90998view10:03, 20 December 2016Kyros12Periodical save, work in progress
90997view07:23, 20 December 2016Kyros12Periodical save, work in progress
90996view06:43, 20 December 2016Kyros12Periodical save, work in progress

External references

DataNodes

View all...
NameTypeDatabase referenceComment
1,3-bisphosphoglycerateMetabolite
2-hydroxyethylthiamine pyrophosphateMetabolite
2-oxoglutarateMetabolite
2-phosphoglycerateMetabolite
2-phosphoglycolateMetabolite
3-keto-2-carboxyarabinitol-1,5-bisphosphateMetabolite
3-keto-2-dioxyarabinitol-1,5-bisphosphateMetabolite
3-phosphoglycerateMetabolite
5,10-methylenetetrahydrofolateMetabolite
ADPMetabolite
ATPMetabolite
ATP synthaseComplex3.6.3.14 (BRENDA)
AcetaldehydeMetabolite
Acetyl-dihydrolipoamideMetabolite
AldolaseGeneProduct
Aldose 1-epimeraseGeneProduct
Alpha-D-GlucoseMetabolite
Alpha-D-Glucose 6-phosphateMetabolite
Amino acid translocatorProtein
AminomethyltransferaseGeneProduct
Beta-D-Fructose 1,6-bisphosphateMetabolite
Beta-D-Fructose 6-phosphateMetabolite
Beta-D-GlucoseMetabolite
Beta-D-Glucose 6-phosphateMetabolite
CO2Metabolite
Calvin cyclePathway
CatalaseGeneProduct
ChlorophyllMetabolite
Chlorophyll A0Metabolite
Coenzyme AMetabolite
Cytochrome b6fComplex1.10.9.1 (BRENDA)
Cytochrome fProtein
DihydrolipoamideMetabolite
Dihydrolipoamide dehydrogenaseGeneProduct
DihydrolipoylMetabolite
Dihydrolipoyl transacetylaseGeneProduct
Dihydroxyacetone phosphateMetabolite
EnolaseGeneProduct
Erythrose 4-phosphateMetabolite
Fe-S complex FaMetabolite
Fe-S complex FbMetabolite
Fe-S complex FxMetabolite
Ferredoxin-NADP+ reductaseGeneProduct
FerredoxinProteinIPR001041 (InterPro)
Fructose 1,6-bisphosphataseGeneProduct
Fructose 1,6-bisphosphateMetabolite
Fructose 6-phosphateMetabolite
Glucose-6-phosphataseGeneProduct
Glucose-6-phosphate 1-epimeraseGeneProduct
Glucose-6-phosphate isomeraseGeneProduct
Glutamate-glyoxylate aminotransferaseGeneProduct
Glutamic acidMetabolite
Glyceraldehyde 3-phosphateMetabolite
Glyceraldehyde-3-phosphate dehydrogenaseGeneProduct
GlycerateMetabolite
Glycerate kinaseGeneProduct
GlycineMetabolite
Glycine cleavagePathway
Glycine dehydrogenaseGeneProduct
Glycine hydroxymethyltransferaseGeneProduct
GlycolaldehydeMetabolite
GlycolateMetabolite
Glycolate oxidaseGeneProduct
Glycolate-glycerate translocatorProtein
GlyoxylateMetabolite
H+Metabolite
H-proteinProtein
H2OMetabolite
H2O2Metabolite
Heme b(n)Metabolite
Heme b(p)Metabolite
HexokinaseGeneProduct
HydroxypyruvateMetabolite
Hydroxypyruvate reductaseGeneProduct
LactateMetabolite
Lactate dehydrogenaseGeneProduct
Light-dependent reactionsPathway
Light-harvesting complexComplexIPR001344 (InterPro)
Light-harvesting proteinsProtein
LipoamideMetabolite
LipoylMetabolite
MetaboliteMetabolite
MitochondrionPathway
NAD+Metabolite
NADHMetabolite
NADP+Metabolite
NADPHMetabolite
NH3Metabolite
OMetabolite
O2Metabolite
Oxygen-evolving complexComplex
P680 reaction centerComplex
P700 reaction centerComplex
PPiMetabolite
PheophytinMetabolite
PhosphoenolpyruvateMetabolite
PhosphofructokinaseGeneProduct
Phosphoglycerate kinaseGeneProduct
Phosphoglycerate mutaseGeneProduct
Phosphoglycolate phosphataseGeneProduct
Phosphopentose epimeraseGeneProduct
Phosphopentose isomeraseGeneProduct
PhosphoribulokinaseGeneProduct
Photons
Photosystem IComplex1.97.1.12 (BRENDA)
Photosystem IIComplex1.10.3.9 (BRENDA)
Phylloquinone A1Metabolite
PiMetabolite
PlastocyaninProteinGLYMA06G02300 (Ensembl Plants)
PlastoquinolMetabolite3819-09-8 (CAS)
PlastoquinoneMetabolite4299-57-4 (CAS)
PyruvateMetabolite
Pyruvate decarboxylaseGeneProduct
Pyruvate dehydrogenaseGeneProduct
Pyruvate kinaseGeneProduct
Pyruvate translocaseGeneProduct
QuinoneMetabolite78919-13-8 (CAS)
Ribose 5-phosphateMetabolite
Ribulose 1,5-bisphosphateMetabolite
Ribulose 5-phosphateMetabolite
Rieske proteinProteinGLYMA12G32580 (Ensembl Plants)
RuBisCOGeneProduct
S-AminomethyldihydrolipoylMetabolite
SedoheptulokinaseGeneProduct
SedoheptuloseMetabolite
Sedoheptulose 1,7-bisphosphataseGeneProduct
Sedoheptulose 1,7-bisphosphateMetabolite
Sedoheptulose 7-phosphateMetabolite
SemiquinoneMetabolite
SerineMetabolite
Serine-glyoxylate transaminaseGeneProduct
TetrahydrofolateMetabolite
Thiamine pyrophosphateMetabolite
ThioredoxinProtein
TransketolaseGeneProduct
Triose phosphate isomeraseGeneProduct
Triose phosphate translocatorProtein
Xylulose 5-phosphateMetabolite
e-

Annotated Interactions

No annotated interactions

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