One carbon metabolism and related pathways (Homo sapiens)
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Oxidative stress enzymes
H2O
H2O2
Bile acid biosynthesis
PLD1
5-oxoproline
L-Cysteine
L-Methionine
PEMT
Dimethylglycine
SHMT1
3-Sulfinoalanine
CBSL
CHDH
CDP-Ethanolamine
Glycine
MAT2A
Homocysteine
5,10-Methenyltetrahydrofolic acid
BAAT
GPX5
BHMT
10-formyldihydrofolate
CSAD
CTH
Glutamate
Sarcosine
TYMS
Hypotaurine
SHMT2
GPX2
O-Phosphoethanolamine
Choline
CEPT1
S-Adenosylmethionine
DMGDH
PCYT1B
SOD2
S-Adenosylhomocysteine
GPX6
DNMT3A
SOD1
Taurine
NADP
L-Serine
GSS
NADPH
GPX3
CDO1
DHFR2
DNM1
SARDH
L-Serine
Phosphatidylethanolamine
Phosphatidylcholines
gamma-Glutamylcysteine
CHPT1
Taurochenodesoxycholic acid
GSR
MAT1A
GCLC
CHKA
GPX1
AHCYL1
ETNK2
GCLM
SOD3
MTHFR
Total Phospholipids
Glutathione (GSH)
Phosphocholine
5-Methyltetrahydrofolic acid
L-Cystathionine
GAD2
Glutathione disulfide (GSSG)
Folic acid
BHMT2
GPX7
PCYT2
Ethanolamine
GPX4
GAD1
CHKB
Betaine
Taurocholic acid
MTR
PCYT1A
CDP-choline
Glycine
GNMT
ETNK1
Tetrahydrofolic acid
2-oxobutanoate
(S)-2-Aminobutanoate
gamma-L-Glutamyl-L-2-aminobutyrate
Ophthalmate
BCAT1
AGXT2
GCLC
GSS
BCAT2
GCLM
Description
This pathway shows the carbon metabolism over grey and related pathways around it. Source
KEGG
. This pathway is part the
CPTAC Assay Portal
.
Comments
HomologyMapper
This pathway was inferred from Mus musculus pathway
WP1770_96326
with a 100.0% conversion rate.
Quality Tags
Ontology Terms
Saving...
No Tags!
Bibliography
''''; https://www.genome.jp/dbget-bin/www_bget?pathway+mmu00270,
History
View all...
Compare
Revision
Action
Time
User
Comment
107153
view
14:23, 17 September 2019
MaintBot
ChEBI identifier normalization
106513
view
21:00, 5 September 2019
Khanspers
connected interactions
106512
view
20:55, 5 September 2019
Khanspers
Modified description
106511
view
20:54, 5 September 2019
Khanspers
added reference
106213
view
12:10, 16 August 2019
MaintBot
HMDB identifier normalization
105765
view
19:36, 15 August 2019
Khanspers
Modified description
105764
view
19:34, 15 August 2019
Khanspers
Modified description
102896
view
10:25, 27 January 2019
Egonw
Replaced two PubChem SID with CID identifiers.
96353
view
17:03, 9 March 2018
Egonw
Converted interactions to regular arrows, which were not mim:conversions.
96327
view
09:30, 8 March 2018
Mkutmon
Updated homology conversion
96235
view
13:30, 1 March 2018
DeSl
Modified description
96234
view
13:30, 1 March 2018
DeSl
Removed licence number and last modified part.
94312
view
12:05, 1 September 2017
Marvin M2
Connected unconnected lines
94206
view
21:13, 25 August 2017
DeSl
Added ID for phosphocholine
93078
view
09:01, 28 July 2017
Elisa
Fixed unconnected interactions (added anchors to lines)
93018
view
09:37, 25 July 2017
DeSl
Added small sidebrach from L-Cystationine to Ophthalmate.
91096
view
01:13, 4 January 2017
Khanspers
connected interactions
90808
view
18:21, 14 December 2016
Khanspers
Ontology Term : 'folate mediated one-carbon metabolic pathway' added !
90807
view
18:20, 14 December 2016
Khanspers
New pathway
External references
DataNodes
View all...
Name
Type
Database reference
Comment
(S)-2-Aminobutanoate
Metabolite
CHEBI:35619 (ChEBI)
10-formyldihydrofolate
Metabolite
HMDB0006485 (HMDB)
2-oxobutanoate
Metabolite
16763 (ChEBI)
3-Sulfinoalanine
Metabolite
C00606 (KEGG Compound)
5,10-Methenyltetrahydrofolic acid
Metabolite
C00445 (KEGG Compound)
5-Methyltetrahydrofolic acid
Metabolite
C00440 (KEGG Compound)
5-oxoproline
Metabolite
C01879 (KEGG Compound)
AGXT2
GeneProduct
ENSG00000113492 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = En:ENSMUSG00000089678
AHCYL1
GeneProduct
ENSG00000168710 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:229709
BAAT
GeneProduct
ENSG00000136881 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:12012
BCAT1
GeneProduct
ENSG00000060982 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = En:ENSMUSG00000030268
BCAT2
GeneProduct
ENSG00000105552 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = En:ENSMUSG00000030826
BHMT2
GeneProduct
ENSG00000132840 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:64918
BHMT
GeneProduct
ENSG00000145692 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:12116
Betaine
Metabolite
C00719 (KEGG Compound)
CBSL
GeneProduct
ENSG00000274276 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:12411
CDO1
GeneProduct
ENSG00000129596 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:12583
CDP-Ethanolamine
Metabolite
C00570 (KEGG Compound)
CDP-choline
Metabolite
C00307 (KEGG Compound)
CEPT1
GeneProduct
ENSG00000134255 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:99712
CHDH
GeneProduct
ENSG00000016391 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:218865
CHKA
GeneProduct
ENSG00000110721 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:12660
CHKB
GeneProduct
ENSG00000100288 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:12651
CHPT1
GeneProduct
ENSG00000111666 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:212862
CSAD
GeneProduct
ENSG00000139631 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:246277
CTH
GeneProduct
ENSG00000116761 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:107869
Choline
Metabolite
C00114 (KEGG Compound)
DHFR2
GeneProduct
ENSG00000178700 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:13361
DMGDH
GeneProduct
ENSG00000132837 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:74129
DNM1
GeneProduct
ENSG00000106976 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:13429
DNMT3A
GeneProduct
ENSG00000119772 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:13435
Dimethylglycine
Metabolite
C01026 (KEGG Compound)
ETNK1
GeneProduct
ENSG00000139163 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:75320
ETNK2
GeneProduct
ENSG00000143845 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:214253
Ethanolamine
Metabolite
C00189 (KEGG Compound)
Folic acid
Metabolite
C00504 (KEGG Compound)
GAD1
GeneProduct
ENSG00000128683 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:14415
GAD2
GeneProduct
ENSG00000136750 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:14417
GCLC
GeneProduct
ENSG00000001084 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = En:ENSMUSG00000032350
GCLM
GeneProduct
ENSG00000023909 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = En:ENSMUSG00000028124
GNMT
GeneProduct
ENSG00000124713 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:14711
GPX1
GeneProduct
ENSG00000233276 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:14775
GPX2
GeneProduct
ENSG00000176153 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:14776
GPX3
GeneProduct
ENSG00000211445 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:14778
GPX4
GeneProduct
ENSG00000167468 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:625249
GPX5
GeneProduct
ENSG00000224586 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:14780
GPX6
GeneProduct
ENSG00000198704 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:75512
GPX7
GeneProduct
ENSG00000116157 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:67305
GSR
GeneProduct
ENSG00000104687 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:14782
GSS
GeneProduct
ENSG00000100983 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = En:ENSMUSG00000027610
Glutamate
Metabolite
C00217 (KEGG Compound)
Glutathione (GSH)
Metabolite
C00051 (KEGG Compound)
Glutathione disulfide (GSSG)
Metabolite
C00127 (KEGG Compound)
Glycine
Metabolite
C00037 (KEGG Compound)
Homocysteine
Metabolite
C05330 (KEGG Compound)
Hypotaurine
Metabolite
C00519 (KEGG Compound)
L-Cystathionine
Metabolite
C02291 (KEGG Compound)
L-Cysteine
Metabolite
C00097 (KEGG Compound)
L-Methionine
Metabolite
HMDB0000696 (HMDB)
L-Serine
Metabolite
C00065 (KEGG Compound)
MAT1A
GeneProduct
ENSG00000151224 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:11720
MAT2A
GeneProduct
ENSG00000168906 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:232087
MTHFR
GeneProduct
ENSG00000177000 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:17769
MTR
GeneProduct
ENSG00000116984 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:238505
NADP
Metabolite
C00006 (KEGG Compound)
NADPH
Metabolite
C00005 (KEGG Compound)
O-Phosphoethanolamine
Metabolite
C00346 (KEGG Compound)
Ophthalmate
Metabolite
7018721 (PubChem-compound)
PCYT1A
GeneProduct
ENSG00000161217 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:13026
PCYT1B
GeneProduct
ENSG00000102230 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:236899
PCYT2
GeneProduct
ENSG00000185813 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:68671
PEMT
GeneProduct
ENSG00000133027 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:18618
PLD1
GeneProduct
ENSG00000075651 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:18805
Phosphatidylcholines
Metabolite
8002-43-5 (CAS)
Phosphatidylethanolamine
Metabolite
C00350 (KEGG Compound)
Phosphocholine
Metabolite
CHEBI:18132 (ChEBI)
S-Adenosylhomocysteine
Metabolite
C00021 (KEGG Compound)
S-Adenosylmethionine
Metabolite
C00019 (KEGG Compound)
SARDH
GeneProduct
ENSG00000123453 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:192166
SHMT1
GeneProduct
ENSG00000176974 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:20425
SHMT2
GeneProduct
ENSG00000182199 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:108037
SOD1
GeneProduct
ENSG00000142168 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:20655
SOD2
GeneProduct
ENSG00000112096 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:20656
SOD3
GeneProduct
ENSG00000109610 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:20657
Sarcosine
Metabolite
C00213 (KEGG Compound)
TYMS
GeneProduct
ENSG00000176890 (Ensembl)
Homology Mapping from Mus musculus to Homo sapiens: Original ID = L:22171
Taurine
Metabolite
C00245 (KEGG Compound)
Taurochenodesoxycholic acid
Metabolite
C05465 (KEGG Compound)
Taurocholic acid
Metabolite
C05122 (KEGG Compound)
Tetrahydrofolic acid
Metabolite
C00101 (KEGG Compound)
Total Phospholipids
Metabolite
16247 (ChEBI)
gamma-Glutamylcysteine
Metabolite
C00669 (KEGG Compound)
gamma-L-Glutamyl-L-2-aminobutyrate
Metabolite
7014903 (PubChem-compound)
Annotated Interactions
No annotated interactions
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